Protein Alignment msi and Hrb98DE

DIOPT Version :9

• Sequence 1: NP_001247303.1
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_524543.1
• Gene: Hrb98DE / 43385
• FlyBaseID: FBgn0001215
• Length: 365
• Species: Drosophila melanogaster
• Alignment Length: 195
• Identity: 71/195 - (36%)
• Similarity: 116/195 - (59%)
• Gaps: 4/195 - (2%)

  Fly   180 NKSGSSGRSTPSLSGGSGSDPA-PGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRS 243
            |::|:|..........|.::|. ..|||:|||.::|:.:.||.:|..:|.:.||::||||.|:||
  Fly     7 NQNGNSNGHDDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRS 71

  Fly   244 RGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPK---NRPRQANKTKKIFVGGVSQDTSAE 305
            |||||||:.....:::..|...|.:||:.::||.|.|:   :.|......||:|||.:..|...:
  Fly    72 RGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQ 136

  Fly   306 EVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
            .::.||..||.:.:..:::|::|.:.|||.||.|::.|.||:|.....|.:..|.|:.|||.||:
  Fly   137 SIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQ 201

  Fly   371  370
              Fly   202  201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_001247303.1	RRM1_hnRNPA_hnRNPD_like	205..276	CDD:240771	30/70 (43%)
		RRM2_MSI	292..365	CDD:240769	24/72 (33%)
Hrb98DE	NP_524543.1	RRM1_hnRNPA_like	32..109	CDD:241022	34/76 (45%)
		RRM_SF	123..195	CDD:302621	24/71 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463951
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840