Protein Alignment msi and hnrnpdl

DIOPT Version :9

• Sequence 1: NP_001247303.1
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_001315423.1
• Gene: hnrnpdl / 406701
• ZFINID: ZDB-GENE-040426-2717
• Length: 296
• Species: Danio rerio
• Alignment Length: 171
• Identity: 78/171 - (45%)
• Similarity: 106/171 - (61%)
• Gaps: 9/171 - (5%)

  Fly   203 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHT 267
            ||:|:|||||.||...|.:|.:.||.|.|..|..||:|.|||||||:.|::..:|::||::..|.
Zfish    30 GKMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLELTEHK 94

  Fly   268 LDGKKIDPKHATP---KNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTK 329
            ||||.||||.|..   |..|      ||:||||:|.|.:.|:::.||..:|.:|...:..|.:|.
Zfish    95 LDGKLIDPKRAKAIKGKEPP------KKVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTN 153

  Fly   330 RHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
            ..|||.||||..|:.|.::.|..:|.|.:.|.|.|.|||||
Zfish   154 ERRGFCFVTFALEEPVQKLLENRYHQIGSGKCEIKVAQPKE 194

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_001247303.1	RRM1_hnRNPA_hnRNPD_like	205..276	CDD:240771	36/70 (51%)
		RRM2_MSI	292..365	CDD:240769	28/72 (39%)
hnrnpdl	NP_001315423.1	RRM1_hnRPDL	31..106	CDD:241202	39/74 (53%)
		RRM2_hnRPDL	116..190	CDD:241029	29/73 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D496221at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920