Protein Alignment msi and bol

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_001261614.1
• Gene: bol / 39049
• FlyBaseID: FBgn0011206
• Length: 233
• Species: Drosophila melanogaster
• Alignment Length: 283
• Identity: 66/283 - (23%)
• Similarity: 102/283 - (36%)
• Gaps: 93/283 - (32%)

  Fly   275 PKHATP---KNRPRQANK-----TKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRH 331
            |..|||   ...|..|.|     ..:|||||:|.||:..::...||.:|.|:.|.:::| :....
  Fly     9 PPSATPGGGLETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVS 72

  Fly   332 RGFGFVTFENEDVVDRV-----CEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQ 391
            :|:||||||.|....|:     |.:    ::::|:.         :.||   ::|:
  Fly    73 KGYGFVTFETEQEAQRLQADGECVV----LRDRKLN---------IAPA---IKKQ--------- 112

  Fly   392 LPTAPGQLIGARGAGVATMNPLAMLQNPTQLLQSPAAAAAAQQAALISQNPFQVQNAAAAASIAN 456
             |.....::...||...|..|.|.:.|           ....|.|.....|.....||...:|
  Fly   113 -PNPLQSIVATNGAVYYTTTPPAPISN-----------IPMDQFAAAVYPPVTDFTAAGVPAI-- 163

  Fly   457 QAGFGKLLTTYPQTALHSVRYAP----YSIPASAATANAALMQAHQAQSVAAAAHHHQQQQQQQH 517
                      ||.:|:   :|.|    ||:|.:..|.                    ..|..|::
  Fly   164 ----------YPPSAM---QYQPFYQYYSVPMNVPTI--------------------WPQNYQEN 195

  Fly   518 HH---QQQTHNAHVAAAQQQQQS 537
            |.   ...|.|.|...:|...||
  Fly   196 HSPLLHSPTSNPHSPHSQSHPQS 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	1/2 (50%)
		RRM2_MSI	292..365	CDD:240769	25/77 (32%)
bol	NP_001261614.1	RRM_DAZL_BOULE	31..111	CDD:409846	27/96 (28%)
		PABP-1234	<45..219	CDD:130689	51/247 (21%)