Protein Alignment msi and rnp-7

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_498565.2
• Gene: rnp-7 / 176002
• WormBaseID: WBGene00004390
• Length: 332
• Species: Caenorhabditis elegans
• Alignment Length: 141
• Identity: 37/141 - (26%)
• Similarity: 62/141 - (43%)
• Gaps: 28/141 - (19%)

  Fly   190 PSLSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEP 254
            |:.:..:..||. ..||||.::::||..||:..|..:|.:..:.::.|. ..:.||:.||.:.:
 Worm    92 PAENPRASEDPY-RTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDE-AGKPRGYAFIEYSD- 153

  Fly   255 CTVEKVLKVPIHT----LDGKKIDPKHATPKNRPRQANKTKKIF----VGGVSQDT-------SA 304
                   |..:||    .||.|:|.|....   ..:..:|:|.:    :||...||       |.
 Worm   154 -------KAEMHTAYKKADGIKVDGKRLVV---DYERGRTQKTWLPRRLGGGKGDTRKTREAKSV 208

  Fly   305 EEVKAYFSQFG 315
            .|.:...|.||
 Worm   209 IEEREIASGFG 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	23/77 (30%)
		RRM2_MSI	292..365	CDD:240769	10/35 (29%)
rnp-7	NP_498565.2	U1snRNP70_N	4..95	CDD:432406	1/2 (50%)
		RRM_snRNP70	103..192	CDD:409682	25/101 (25%)