Protein Alignment msi and LOC100911361

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_001417282.1
• Gene: LOC100911361 / 100911361
• RGDID: 6493616
• Length: 357
• Species: Rattus norvegicus
• Alignment Length: 186
• Identity: 73/186 - (39%)
• Similarity: 114/186 - (61%)
• Gaps: 7/186 - (3%)

  Fly   197 GSDPAP----GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTV 257
            |.||..    .|||:||||::|:.|.|:|:|..:||:||.::|:||.|:|||||||:|:.....|
  Rat     3 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67

  Fly   258 EKVLKVPIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEE 319
            :..:....|.:||:.::||.|..:.   :|......|||||||:.:||....::.||.::|.:|.
  Rat    68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132

  Fly   320 TVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPA 375
            ..::.|:|:.:.|||.||||::.|.||::....:|||.....|.|||..|:.:..|
  Rat   133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSA 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	34/73 (47%)
		RRM2_MSI	292..365	CDD:240769	28/72 (39%)
LOC100911361	NP_001417282.1	None