DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5112 and GatA

DIOPT Version :9

Sequence 1:NP_651400.1 Gene:CG5112 / 43083 FlyBaseID:FBgn0039341 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster


Alignment Length:515 Identity:129/515 - (25%)
Similarity:199/515 - (38%) Gaps:150/515 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RDLNAVVDGPFPEALDQAREIDRKLDEKE-YSDEDLRRLPFLGVPFSTKDS-------TAVAGRL 139
            :.|||.|.....:|..||::.:::...:: .||.|       ||..:.||:       |..|.|:
  Fly    38 KTLNAFVRLTPEQAGQQAQDAEQRYKLRQPISDLD-------GVTIAIKDNFCTKDVHTTCASRM 95

  Fly   140 HTLGLLARKSERSTTDAECVRLMKESGAIIIATSNVPEVNKWIESRNMLIGCTNNPY--DLR--- 199
                   .:......||.....:|::||:|:..:|:.:......:.:.|.|.|.|.:  ||.   
  Fly    96 -------LQDFVPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLNKDH 153

  Fly   200 -RSVGGSSGGEAALIAACCTGFGLGTDIGGSIRIPAFNCGIFGHKPTSGAVNMAGCTFRTGKEKD 263
             |..||||||.|:.:||......:|:|.|||.|.||..||:.|.|||.|.|:..|..    ...:
  Fly   154 WRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLI----PLVN 214

  Fly   264 TMVCAGPMSRSARDLLPMMQVLVEPSLKAKLKLDQ----------------KVDLKRLRYFYVSS 312
            :|...|..:||..|.:.::..:..|.     |||.                ::||..:|.     
  Fly   215 SMDVPGIFARSVSDCVAVLNTVAGPD-----KLDSTTIRQPFTRLHLPEVGQIDLSTVRI----- 269

  Fly   313 NGMAQ---CNPINRETERVMYKIRKHFEAVSGKDVRHADLPYT-------------KLTGKMWRY 361
             |:.:   |:.::.|......|:....|. ||..||...||.|             ::...|.||
  Fly   270 -GIPKEYHCHGLSAEVLETWSKVADLLEC-SGASVRQVSLPNTAASIFVYTILNQCEVASNMARY 332

  Fly   362 -------WMTQEPANFNLLLGNGAELNPFVELFKKILGQSDYSMAAIYGLIDSVLPKEK------ 413
                   ..|.|.:...|...:.||            |.:|.....|  |..:.|..:|      
  Fly   333 DGIEYGHRATDERSTEQLYALSRAE------------GFNDVVKTRI--LTGNFLLLKKNYDHYF 383

  Fly   414 EKLMREATAKCKKSVQDLLGDDGVLFFHSS-----------PRT---APFHYYPLVKFNDFAYFS 464
            ||.:|         |:.|:.:|....|.||           |.|   ||.       :.|||  |
  Fly   384 EKALR---------VRRLIAEDFARVFDSSAKEERVDILLTPTTLTEAPL-------YKDFA--S 430

  Fly   465 L---------------FNVLHLPATQVPMGLDSKGMPLGIQVVANPNNDRLCLAVAEELE 509
            |               .|:..:||..:|:.|...|:||.:|:::|..|::|.|.||..:|
  Fly   431 LTNRDQCAVQDFCTQPANMAGIPAVSIPIRLSQAGLPLSLQLMSNSLNEQLLLTVARWIE 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5112NP_651400.1 PRK07488 52..513 CDD:236030 129/515 (25%)
Amidase 69..502 CDD:302749 125/506 (25%)
GatANP_650775.2 PRK07488 8..491 CDD:236030 129/515 (25%)
gatA 18..490 CDD:234572 128/513 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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