DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and CHD1L

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_004275.4 Gene:CHD1L / 9557 HGNCID:1916 Length:897 Species:Homo sapiens


Alignment Length:948 Identity:214/948 - (22%)
Similarity:350/948 - (36%) Gaps:317/948 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 LKPHQVAGVKFMWDA----CFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGV 515
            |:.:|:.||.  |.|    |           .:||||...||||||.|.:.|  .:.:..|....
Human    46 LRSYQLEGVN--WLAQRFHC-----------QNGCILGDEMGLGKTCQTIAL--FIYLAGRLNDE 95

  Fly   516 DRVLIISPLSTVNNWAREFTSWMKFANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVCILGYDM 580
            ...||:.|||.::||..|.   .:||.......|    ..||..|            .|:     
Human    96 GPFLILCPLSVLSNWKEEM---QRFAPGLSCVTY----AGDKEER------------ACL----- 136

  Fly   581 YRILANEKAKGLRKKQREQLMQALVD------------PGPDLVVCDEGHLLKNEKTSISKAVTR 633
                    .:.|:::.|..::....:            |...||| ||.|.|||:.:.:.|.::.
Human   137 --------QQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVV-DEAHRLKNQSSLLHKTLSE 192

  Fly   634 MRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKH 698
            ......::|||||:||:|:|.|.::.||:|:|..  ||.:..|:.     :|     :|:.....
Human   193 FSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFS--KEEVGDFIQ-----RY-----QDIEKESE 245

  Fly   699 RSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVVGKGA 763
            .:..|||||:..:.||..:.:|..||.|.|.|:|..:|.||:|.|                    
Human   246 SASELHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYY-------------------- 290

  Fly   764 RLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKS 828
                                        |.:|.   .|::.|      |:|.|            
Human   291 ----------------------------KAILM---KDLDAF------ENETA------------ 306

  Fly   829 DASMSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQK--DDPSEW----WKPFVE 887
                          ||.|.:|             :|      |.::|  |.|..:    .:||..
Human   307 --------------KKVKLQN-------------IL------SQLRKCVDHPYLFDGVEPEPFEV 338

  Fly   888 ERELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGD 952
            ...|...  |.||.:|.:||....:.|.::|:|||..|.||:::.::                 |
Human   339 GDHLTEA--SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYM-----------------D 384

  Fly   953 FKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDV 1017
            ::     |..|.|:|||...|:|....|.|......   :||:||||||:|:||.||:.|:..|.
Human   385 YR-----GYSYERVDGSVRGEERHLAIKNFGQQPIF---VFLLSTRAGGVGMNLTAADTVIFVDS 441

  Fly  1018 SWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQT 1082
            .:||.:|.|:..|.:|.||.|...:.|||...|:|:.||.:..:|......:|:    ..|:...
Human   442 DFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIE----GGHFTLG 502

  Fly  1083 DLMELYSYELKPSTEREMPI-----LPKDRLFAEILTEHEKLIFKYHEHDSLL------------ 1130
                    ..||:.:.::.:     ...|:|.|...:..:::     :.:|:|            
Human   503 --------AQKPAADADLQLSEILKFGLDKLLASEGSTMDEI-----DLESILGETKDGQWVSDA 554

  Fly  1131 ---------EQEEHEN-------------LTEEERKSAWAEYEAEKTRTVQASQYMSYDRNAFGN 1173
                     :|||.:|             .::|:|||.......:||...:|||.....||. |:
Human   555 LPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKASQEGRSLRNK-GS 618

  Fly  1174 QVMGQFGNASGSVTSNKIF----------------GFRSDILLQLLNMKISKDHQ------ELNQ 1216
            .::.  |...||....::.                ..|..::.:....|...:|:      |.|.
Human   619 VLIP--GLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKKKMAWWESNN 681

  Fly  1217 NQVIQLVPTYLQQLYNEMNNGDPTM----YKD-----LLNLHSNIVHPSGMYMNPLLYANQNPNA 1272
            .|...|.....:.  .::.||:.:.    |:|     |..:..::.||.....:.|:....:.:.
Human   682 YQSFCLPSEESEP--EDLENGEESSAELDYQDPDATSLKYVSGDVTHPQAGAEDALIVHCVDDSG 744

  Fly  1273 AGYNQGTGGVPPMAGGSVAHGPPAAPAPGFEPDKVYEI 1310
               :.|.||:           ..|......||.|:||:
Human   745 ---HWGRGGL-----------FTALEKRSAEPRKIYEL 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 1/4 (25%)
HepA <382..1071 CDD:440319 162/637 (25%)
DEXHc_ATRX 455..699 CDD:350826 67/259 (26%)
CHD1LNP_004275.4 PLN03142 46..699 CDD:215601 197/863 (23%)
DEAH box 174..177 2/2 (100%)
Regulatory linker segment (RLS). /evidence=ECO:0000269|PubMed:33357431 601..635 10/36 (28%)
Required for ATPase activity. /evidence=ECO:0000269|PubMed:29220653 615..673 8/60 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 628..654 1/25 (4%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 687..711 4/25 (16%)
Macro_Poa1p-like_SNF2 716..866 CDD:394880 13/67 (19%)

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