DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and CHR4

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_199293.3 Gene:CHR4 / 834510 AraportID:AT5G44800 Length:2223 Species:Arabidopsis thaliana


Alignment Length:1352 Identity:282/1352 - (20%)
Similarity:493/1352 - (36%) Gaps:453/1352 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSSVSRRESATESKSASESESSPPRSNTKQSRTHKNVKASGKATVSSSSD------------SDQ 76
            ||.:|..:|:.:.||.|..||                |::||...||..|            .|:
plant   163 SSIISGEQSSEKGKSISAEES----------------KSTGKEVYSSPMDGCSTAELGHASADDR 211

  Fly    77 AVANSSANDEEKEPVCKIRIVPLEKLLASPKTKERPSRGSQQKNVTINDSSDEEPLKGSKLVLPA 141
            ..::|...|:..:||     :|         |.:.||    ...:|:....|   |..||     
plant   212 PDSSSHGEDDLGKPV-----IP---------TADLPS----DAGLTLLSCED---LSESK----- 250

  Fly   142 RKSRNKNASIIELSDSEEVDEEEESLLVAIPLPK-EAQQTKPEKNSSKASKESIE-KRQKAQKE- 203
                        |||:|:..|        .|:.| |...::..:|.:.|..|:.: ||:|.::| 
plant   251 ------------LSDTEKTHE--------APVEKLEHASSEIVENKTVAEMETGKGKRKKRKREL 295

  Fly   204 --------ATTSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCVVRLKRVSLP--KTK 258
                    ..|...||.:|:  ::.||     ||:.:.|...|..:.|:..|.||.:|.|  ||:
plant   296 NDGESLERCKTDKKRAKKSL--SKVGS-----SSQTTKSPESSKKKKKKNRVTLKSLSKPQSKTE 353

  Fly   259 PAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYE------------------APAAEEEEE 305
            ..:|.||:..:...|...:.||......:.|....:.:                  :..:::...
plant   354 TPEKVKKLPKEERRAVRATNKSSSCLEDTNSLPVGNLQVHRVLGCRIQGLTKTSLCSALSDDLCS 418

  Fly   306 EERKSSGDEEEAANSSDSEVMPQRKRRRKKSESDKGSSDFEPEEKQK------KKGRKRIKKTSS 364
            :..:::...:.....:::|::....|....||:.|.|.|....:|..      .:|...:|:...
plant   419 DNLQATDQRDSLVQDTNAELVVAEDRIDSSSETGKSSRDSRLRDKDMDDSALGTEGMVEVKEEML 483

  Fly   365 GESDGDG------DDDKQKNKRKHI---RKIIK-----------TKDLDLTTKEAAKEEDDRRKR 409
            .|...:.      ||:..|....|:   |::::           ..|.::....|||..|...:.
plant   484 SEDISNATLSRHVDDEDMKVSETHVSVERELLEEAHQETGEKSTVADEEIEEPVAAKTSDLIGET 548

  Fly   410 IE--------DRQKLYNRIFVKSE------------SVEINELVLDFDEESKK-----ALLQVDK 449
            :.        |:..::|....::|            ..:....|::..|:..|     ..|:|.|
plant   549 VSYEFLVKWVDKSNIHNTWISEAELKGLAKRKLENYKAKYGTAVINICEDKWKQPQRIVALRVSK 613

  Fly   450 GLLKKLKPHQVAGVKF--------MWDACFE---------------------------------- 472
                  :.:|.|.||:        .|::..|                                  
plant   614 ------EGNQEAYVKWTGLAYDECTWESLEEPILKHSSHLIDLFHQYEQKTLERNSKGNPTRERG 672

  Fly   473 ---TLKESQEKPGSGCILAH----------C------------MGLGKTLQVVTLSHTLLVNTRR 512
               ||.|..::...|.:.||          |            ||||||:.......:|..   .
plant   673 EVVTLTEQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYF---E 734

  Fly   513 TGVDR-VLIISPLSTVNNWAREFTSWMKFAN----------RNDIEVYD-----ISRYKDKPTRI 561
            .||.| .|::.||||:.||..||:.|....|          |..|..|:     .:....|||. 
plant   735 FGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTS- 798

  Fly   562 FKLNEWFNEGGVCILGYDMYRILANEK-AKGLRKKQREQLMQALVDPGP-DLVVCDEGHLLKNEK 624
            :|.|       |.:..|:|  :||:.. .:|:                | :::|.||||.|||.:
plant   799 YKFN-------VLLTTYEM--VLADSSHLRGV----------------PWEVLVVDEGHRLKNSE 838

  Fly   625 TSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDST 689
            :.:...:.....:.|::|||||||||:.|.|.::.|::|:...:...:..|| :.:|:.:..:..
plant   839 SKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERF-HDLTSAEKVEEL 902

  Fly   690 ERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQS 754
            ::.:     ..|:|.:|.:..:|.         :|||.|.:|...|:.:|.:.|...:|.:.:..
plant   903 KKLV-----APHMLRRLKKDAMQN---------IPPKTERMVPVELTSIQAEYYRAMLTKNYQIL 953

  Fly   755 GGDVVGKGA---RLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAA 816
            ..  :|||.   .:......||::..||                         ::...| |.|:.
plant   954 RN--IGKGVAQQSMLNIVMQLRKVCNHP-------------------------YLIPGT-EPESG 990

  Fly   817 SNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQKDDPSEW 881
            |                                           ||.|..:              
plant   991 S-------------------------------------------LEFLHDM-------------- 998

  Fly   882 WKPFVEERELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEF 946
                       .:..|.||.:|..:|:.....|.::|:|||..:.||::|.:|        |.||
plant   999 -----------RIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYL--------NIEF 1044

  Fly   947 EGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANR 1011
                        ..|.:.|:|||.:|..|:|...:||...|  ..:||:||||.||||||..|:.
plant  1045 ------------GPKTFERVDGSVAVADRQAAIARFNQDKN--RFVFLLSTRACGLGINLATADT 1095

  Fly  1012 VVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQIS 1076
            |:|:|..:||..|.|::.|.:|.||.|...:|||:...::|:::.  |:||:   |.::|:..::
plant  1096 VIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERIL--QLAKK---KLMLDQLFVN 1155

  Fly  1077 RHYNQTDLMELYSYELKPSTEREMPILPKDRLFAEILTEHEKLIFKYHEH-DSLLEQEE------ 1134
            :..:|.:..::    |:..||         .||.:...|::|...:.:.: |.:::.|.      
plant  1156 KSGSQKEFEDI----LRWGTE---------ELFNDSAGENKKDTAESNGNLDVIMDLESKSRKKG 1207

  Fly  1135 -------HENLTEEERKSAWAEYEAEKTRTVQASQYMSYDR--NAFGNQVMG 1177
                   .:..||...|..|.:....|.......|..|.|.  ....|.::|
plant  1208 GGLGDVYQDKCTEGNGKIVWDDIAIMKLLDRSNLQSASTDAADTELDNDMLG 1259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 64/368 (17%)
HepA <382..1071 CDD:440319 178/815 (22%)
DEXHc_ATRX 455..699 CDD:350826 74/328 (23%)
CHR4NP_199293.3 PHD2_CHD_II 78..119 CDD:277007
CD1_tandem 507..585 CDD:349307 10/77 (13%)
CD2_tandem 600..653 CDD:349306 10/58 (17%)
PLN03142 675..>1197 CDD:215601 166/701 (24%)
DUF1087 <1306..1341 CDD:461922
SANT_TRF 1705..1749 CDD:212558
Blue background indicates that the domain is not in the aligned region.

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