DRSC/TRiP Functional Genomics Resources

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Protein Alignment XNP and Rad54l2

DIOPT Version :9

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_109655.2 Gene:Rad54l2 / 81000 MGIID:1933196 Length:1467 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 DTHCT 258..335 CDD:285332
SNF2_N 458..779 CDD:278600
DEXDc 483..646 CDD:238005
Helicase_C 913..1035 CDD:278689
Rad54l2NP_109655.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..236
SNF2_N 274..628 CDD:278600
DEXDc 300..492 CDD:238005
DEAH box 463..466
LXXLL motif 1 551..555
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 650..671
Helicase_C 720..854 CDD:278689
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1027..1046
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1121..1171
SPATA3 1123..>1234 CDD:292290
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1185..1213
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1260..1282
LXXLL motif 2 1329..1333
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1445..1467
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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