DRSC/TRiP Functional Genomics Resources

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Protein Alignment XNP and chd9

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:XP_031756017.1 Gene:chd9 / 733830 XenbaseID:XB-GENE-1217623 Length:2891 Species:Xenopus tropicalis


Alignment Length:1348 Identity:291/1348 - (21%)
Similarity:495/1348 - (36%) Gaps:417/1348 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GKKNPNAR-HTDAATPLTTDDSNSSSVSRRESA------TESKSASESESSPPRSNTKQSRTHKN 59
            |..||||. |           ||:..|.:...|      |:....:.:.:.|..|:|:....:.:
 Frog   304 GMMNPNAELH-----------SNNFQVVQSSHAHGNFNRTKMSPETINFTHPDGSSTQMRHFNDH 357

  Fly    60 VKASGKATVSSS--SDSDQAVANSSANDEEKEPVCKIRIVPLEKLLASPKTKERPSRGSQQKNVT 122
            ::.:|.:.:..:  ...|....:.|..|.|.        :..|.||   |..:.||...:..|.:
 Frog   358 IENNGFSPLEDTLLQHVDAQTEHFSGLDPED--------LLQEDLL---KHFDEPSFSQEDANSS 411

  Fly   123 INDSSDEE--------PLKGSKLVLPARKSRNKNASIIELSDS-EEVDEEEESLLVAIPLPKEAQ 178
            .|....::        .:|....:|.::...|.:.  ..|||| ..:.:||:........|..::
 Frog   412 SNILEHQDMKITFARTQIKLQNDILGSQPHNNHHP--WHLSDSNHHLPQEEKQHCTFQGKPPSSK 474

  Fly   179 QT------------KPEKNSSKASKESIE---KRQKAQKEATTSSARAIRSVNGTRRGS-----L 223
            :|            |....|.|..|:.::   |::||.:..:.:.|:|      ..||.     :
 Frog   475 KTDGFRAFQRLANIKVRSASDKRPKKKVDTESKQEKANRIISEAIAKA------KERGERNIPRV 533

  Fly   224 SSERSSRASSSRAESPPRPKRCVVRLKRVSLPKTKPAQKPKK-MSSDSEE-------AATTSKKS 280
            .|..:..:.||..:...|.:      |..|.||.|..:|.|. :||:.:|       ..|..:|.
 Frog   534 MSPENFPSVSSEGKDEKRGR------KGKSKPKEKEGKKTKAGLSSELKEKKKIGKLIITLGRKQ 592

  Fly   281 RQRRSKSESEADSDYEAPAAEEEEE-EERKSSGDEEEAANSSDSEVMPQRKRRRKKSESDKGSSD 344
            :::...|:..:||| .||....:|: :|.....|......:...:....|:.:|||...|.....
 Frog   593 KRKMESSDDVSDSD-RAPRVHNDEDLQEFAWRTDHLHQDQTGSMKRRSNRQVKRKKYVEDVEGKQ 656

  Fly   345 FEPEEKQKKKGRK--------------------------------RI--KKTSSG---ESDGDGD 372
            .|.|.|...|.:|                                ||  |:||||   |.:    
 Frog   657 SEDEPKANVKPKKNSTSLPVEQPLQLFVENPSEEDAAIVDKILASRIAKKETSSGTFVEVE---- 717

  Fly   373 DDKQKNKRKHIRKIIKTKDLDLTTKEAAKEED---DRR-----KRIEDRQ------------KLY 417
                       ...:|.|:......|.|.|:.   |:|     ||.:.||            :|:
 Frog   718 -----------EYYVKYKNYSYLHCEWATEQQLLKDKRIHQKIKRFKIRQAQRAHFFADMEEELF 771

  Fly   418 NRIFVKSESVEINELVLDFD-----------------EESKKALLQ-VDKG------LLKKLKPH 458
            |..:::.:.|....|..|.|                 |:|...|.: ||:.      .|:.||| 
 Frog   772 NSDYIEVDRVLEVSLCQDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIDEFEQLQALKP- 835

  Fly   459 QVAGVKFMWDA---------CFETLKESQE-KPGS---------------------GCILAHCMG 492
                     ||         .::.:.:|:| |.|:                     .||||..||
 Frog   836 ---------DARRVERPPPNSWKKINQSREYKIGNQLREYQLEGLNWLLFNWYNRRNCILADEMG 891

  Fly   493 LGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSWM---------KFANRNDIEV 548
            ||||:|.:|....:.:| |..|  ..|||:||||:.||.|||.:|.         ...:|..|:.
 Frog   892 LGKTIQSITFLQEIYLN-RIPG--PFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQ 953

  Fly   549 YDISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDL-- 611
            |:: .::|...||.    |.:        |..:.|:..              .:.::...|:|  
 Frog   954 YEM-YFRDSQGRII----WGS--------YKFHAIITT--------------FEMILGGCPELNA 991

  Fly   612 -----VVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKE 671
                 |:.||.|.|||:...:.:.:..|..:.:::||||||||.:.|.:.::.|::|....:...
 Frog   992 IEWRCVIFDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPQRFPSEST 1056

  Fly   672 YMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLS 736
            :|..|.:..|..|...               |..:|:..:.||....:...|.||.|.::...|:
 Frog  1057 FMQEFGDLKTEEQVQK---------------LQAILKPMMLRRLKEDVEKKLAPKEETIIEVELT 1106

  Fly   737 ELQQKLYGYYMTTHREQSGGDVVGKGA------RLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLL 795
            .:|:|.|...:     :.....:.|||      .|.....:||:...||..::...:.::.:   
 Frog  1107 NIQKKYYRAIL-----EKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGE--- 1163

  Fly   796 SNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNAGGGDSDSD 860
                       ..||....||            |..:..:..|:|                    
 Frog  1164 -----------FRETYNQMAA------------DFYLQAMIQSAG-------------------- 1185

  Fly   861 LEMLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQ 925
                                                  ||:::.:||.:.:|.|.|:|:|||.::
 Frog  1186 --------------------------------------KLVLIDKLLPKMKAGGHKVLIFSQMVR 1212

  Fly   926 SLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRA 990
            .||::|.:|.     .|.|.:|                 |:||......|:|...:|:...:.|.
 Frog  1213 CLDILEDYLM-----HKRYLYE-----------------RIDGRVRGNLRQAAIDRFSKPDSDRF 1255

  Fly   991 RLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKV 1055
             :||:.||||||||||.||:..:|||..|||.:|.|:..|.:|.||.|...:||||...:.|:::
 Frog  1256 -VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREM 1319

  Fly  1056 YERQVAKQATAKRVIDEQQISRHYNQTDLMELYSYELKPSTEREMPILPKDRLFAEILTEHEKLI 1120
            ::|...|....|.|:  |.:|...|....::..|       ::|:..|.:...:..|:.|.::  
 Frog  1320 FDRASLKLGLDKAVL--QSMSGRENSVGGIQQLS-------KKEIEDLLRRGAYGAIMDEEDE-- 1373

  Fly  1121 FKYHEHDSLLEQEEHENLTEEERKSAWAEYEAEKTRTVQASQYMSYDR 1168
                  .|...:|:.:.:.:...|:...|.|...:...:||...|.:|
 Frog  1374 ------GSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNR 1415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 82/396 (21%)
HepA <382..1071 CDD:440319 182/785 (23%)
DEXHc_ATRX 455..699 CDD:350826 71/290 (24%)
chd9XP_031756017.1 CDC27 <469..675 CDD:462819 48/218 (22%)
CD1_tandem_CHD5-9_like 689..753 CDD:349315 17/78 (22%)
CD2_tandem_CHD5-9_like 774..831 CDD:349310 9/56 (16%)
PLN03142 859..>1488 CDD:215601 168/731 (23%)
BRK 2477..2518 CDD:462196
BRK 2552..2596 CDD:197800
Blue background indicates that the domain is not in the aligned region.

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