Sequence 1: | NP_651398.1 | Gene: | XNP / 43080 | FlyBaseID: | FBgn0039338 | Length: | 1311 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001076824.1 | Gene: | rad54l2 / 733747 | XenbaseID: | XB-GENE-5829376 | Length: | 1396 | Species: | Xenopus tropicalis |
Alignment Length: | 1077 | Identity: | 345/1077 - (32%) |
---|---|---|---|
Similarity: | 526/1077 - (48%) | Gaps: | 241/1077 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 253 SLPKTKPAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEEERKSSGDEEEA 317
Fly 318 ANSSDSEVMPQRKRRRKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSGESDGDGDDDKQK----- 377
Fly 378 -NKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQKLY---------NRIFVKSE----SVE 428
Fly 429 INELV-------LD-----FDEESK---------------------------------------- 441
Fly 442 -------KALLQVD---------------------KGLLKKLKPHQVAGVKFMWDACFETLKESQ 478
Fly 479 EKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSWM----- 538
Fly 539 ---------------KFANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILA--- 585
Fly 586 ---------NEKAKG-----LRKKQREQLM-----QALVDPGPDLVVCDEGHLLKNEKTSISKAV 631
Fly 632 TRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLM 696
Fly 697 KHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVVGK 761
Fly 762 GARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETF 826
Fly 827 KSDASMSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQKDD---PSEWWKPFVEE 888
Fly 889 RELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDF 953
Fly 954 KGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVS 1018
Fly 1019 WNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQTD 1083
Fly 1084 LMELYSY-ELKPSTEREMPILPKDRLFAEIL----TEHEKLIFKY-HEHDSLLEQEEHENLTEEE 1142
Fly 1143 RKSAWAEYEAEK------TRTVQASQYMSYDRNAFGN 1173 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
XNP | NP_651398.1 | DTHCT | 258..335 | CDD:285332 | 16/76 (21%) |
SNF2_N | 458..779 | CDD:278600 | 144/362 (40%) | ||
DEXDc | 483..646 | CDD:238005 | 74/204 (36%) | ||
Helicase_C | 913..1035 | CDD:278689 | 61/121 (50%) | ||
rad54l2 | NP_001076824.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..103 | 32/134 (24%) | |
HepA | 88..902 | CDD:223627 | 288/858 (34%) | ||
DEXHc_ARIP4 | 269..545 | CDD:350827 | 114/285 (40%) | ||
DEAH box | 461..464 | 2/2 (100%) | |||
LXXLL motif 1 | 549..553 | 2/3 (67%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1117..1168 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1194..1250 | ||||
LXXLL motif 2 | 1273..1277 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1340..1396 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D111318at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |