DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and SMARCAD1

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_001121901.1 Gene:SMARCAD1 / 56916 HGNCID:18398 Length:1028 Species:Homo sapiens


Alignment Length:1223 Identity:270/1223 - (22%)
Similarity:462/1223 - (37%) Gaps:325/1223 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KKNPNARHTDAATPLTTDDSNSSSVSRRESATESKSASE-SESSPPRSNTKQSRTHKNV------ 60
            :|.........|||..:....||.:|.  ||.|..:..| |.::.|.|:..:.....:|      
Human    12 EKRNKIEEAPEATPQPSQPGPSSPISL--SAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDN 74

  Fly    61 --KAS--------GKATVSSSSDSDQAVANSSANDEEKEPVCKIRIVPLEKLLASPKTKERPSRG 115
              |||        |...:..||||:..|:.:.:|..:::...|..::.:.:.....:::..|:..
Human    75 ERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMA 139

  Fly   116 SQQKNVT-INDSSDEEPLKGSKL-----VLPARKSRNKNASIIE--------------------- 153
            .:..::: :.|.|:.|.||.:||     :.|.| |.|....:||                     
Human   140 RRNDDISELEDLSELEDLKDAKLQTLKELFPQR-SDNDLLKLIESTSTMDGAIAAALLMFGDAGG 203

  Fly   154 ------LSDSEEVDEEEESLLVAIPLPKEAQQTK-------PEKNSSKASKESIEKRQ----KAQ 201
                  ||.|.|..||:|.        .:.|..|       .|.|.|..|..:.||::    |.|
Human   204 GPRKRKLSSSSEPYEEDEF--------NDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQ 260

  Fly   202 KEATTSSARAIRSV---------------------NGTRRGSLSSERSSRASSSRAESPPRPKRC 245
            ||......:.:|.|                     ...:..|.|...:.:..|||:::.|:    
Human   261 KEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPK---- 321

  Fly   246 VVRLKRVSLPKTKPAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEEERKS 310
                   :..|||..|   |.|..::......:|......|...| ||:|::.:......:|..|
Human   322 -------NATKTKLKQ---KFSMKAQNGFNKKRKKNVFNPKRVVE-DSEYDSGSDVGSSLDEDYS 375

  Fly   311 SGDEEEAANSSDSEVMP---QRKRRRKKSESDKGSSDFEPEEKQKKKGR-KRIKKTSSGESDGDG 371
            ||:          |||.   :.|......::..|.....|:..|||..: ..::..:|.|:    
Human   376 SGE----------EVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEA---- 426

  Fly   372 DDDKQKNKRKHIRKIIKT----KDLDLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEINEL 432
                      ...|:.||    :||....|...:|.|           :..|:..|.|.:. |:|
Human   427 ----------LFTKMSKTNGLSEDLIWHCKTLIQERD-----------VVIRLMNKCEDIS-NKL 469

  Fly   433 VLDFDEESKKALLQVDKG---------LLKK---LKPHQVAGVKFMWDACFETLKESQEKPGSGC 485
                   :|:..:....|         :|.:   |||:|..|:.  |.|..       .|.|...
Human   470 -------TKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLN--WLALV-------HKHGLNG 518

  Fly   486 ILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSWMKFANRNDIEVYD 550
            |||..||||||:|.:... ..|......|..  ||:.|.||::||.||...|.....   :..|.
Human   519 ILADEMGLGKTIQAIAFL-AYLYQEGNNGPH--LIVVPASTIDNWLREVNLWCPTLK---VLCYY 577

  Fly   551 ISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCD 615
            .|:.:.|..| |.::..:.:..|.:..|:.....:::::...|.|.             :..:.|
Human   578 GSQEERKQIR-FNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKL-------------NYAIFD 628

  Fly   616 EGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPI 680
            |||:|||..:...:.:..:....|::|||||:||||.|...::.||.|::..:....:.|..:..
Human   629 EGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSK 693

  Fly   681 TNGQYTDSTERDLRLMKHRSHILH--KLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLY 743
            |.       ..|.:.:..:..|.|  ::::..|.||....:...||||.:.:....:||.|::||
Human   694 TK-------SADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLY 751

  Fly   744 GYYMTTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICD 808
            .......::.....|..|...:......||::..||:   ::.....|::|     .:|...:..
Human   752 LGLFNRLKKSINNLVTEKNTEMCNVMMQLRKMANHPL---LHRQYYTAEKL-----KEMSQLMLK 808

  Fly   809 ETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSV 873
            |....||           ..|.....:...                  :|.:|.:|         
Human   809 EPTHCEA-----------NPDLIFEDMEVM------------------TDFELHVL--------- 835

  Fly   874 QKDDPSEWWKPFVEERELNN-------VHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIE 931
                       ..:.|.:||       :..|.|..:|..:|.:.:..||::::|||....||::|
Human   836 -----------CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILE 889

  Fly   932 HFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLIS 996
            ..|       |:::..               |.||||...:.:|..:..:||  |::...:||:|
Human   890 VLL-------KHHQHR---------------YLRLDGKTQISERIHLIDEFN--TDMDIFVFLLS 930

  Fly   997 TRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVA 1061
            |:||||||||.:||.|::.|:..||.:|.|:..|.:|.||.|...:.:||:.||:|:.:.:    
Human   931 TKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLK---- 991

  Fly  1062 KQATAKRVIDEQQISRHYNQTDLMELYSYELKPSTEREMPILPKDRLFAEILT 1114
                    |::|::....:.|.:.|        ..|..||        |:|.|
Human   992 --------INQQKLKLEQDMTTVDE--------GDEGSMP--------ADIAT 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 66/338 (20%)
HepA <382..1071 CDD:440319 166/713 (23%)
DEXHc_ATRX 455..699 CDD:350826 64/243 (26%)
SMARCAD1NP_001121901.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 18/71 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..251 13/55 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..328 8/36 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..373 4/19 (21%)
HepA <496..999 CDD:440319 152/631 (24%)
DEGH box 628..631 2/2 (100%)
Nuclear localization signal. /evidence=ECO:0000255 721..738 6/16 (38%)
DEGD box 1007..1010 1/10 (10%)

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