DRSC/TRiP Functional Genomics Resources

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Protein Alignment XNP and smarcad1a

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_001018610.2 Gene:smarcad1a / 557875 ZFINID:ZDB-GENE-050522-499 Length:972 Species:Danio rerio


Alignment Length:1124 Identity:249/1124 - (22%)
Similarity:420/1124 - (37%) Gaps:308/1124 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DDSNSSSVSRRESATESKSASESESSPPRSNTKQSRTHKNVKASGKATVSSSSDSDQAVANSSAN 84
            |.|||..        |:|.|.:.::.....:.|.||......:|....|....||...:......
Zfish    25 DGSNSDK--------ENKQAHQRKADGQFPSGKTSRQVLEDVSSDDEVVRMGKDSASDLQQHINK 81

  Fly    85 DEEKEPVCKIRIVP------LEKLLASPKT------------KERPSRGSQQKNVTINDSSDEEP 131
            |.|.:.:..:.|.|      |.:::.:..|            .:..|.|.:.|....:|  |::|
Zfish    82 DMEDKIIKLLEIFPQKSKKDLLEVIENTSTLDGAVAHCLMIYGDEDSGGRKDKGGRSDD--DDQP 144

  Fly   132 LKGSKLVLPARKSRNKNASIIELSDSEEVDEEEESLLVAIPLPKEAQQTKPEKNSSKASKESIEK 196
            .|       .||.:..::|..|..|||:.:.||.|......|.|:.::..|:  ..|.....|.|
Zfish   145 KK-------KRKIQRSDSSESEDEDSEDEESEEPSREKQEALLKKLKRKLPD--IEKEVLRDILK 200

  Fly   197 RQKAQKEATTSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCVVRLKRVSLPKTKPAQ 261
            ......|....|.....|.:.:......|::.|::|.|:.::                  .|..|
Zfish   201 EHDWDYENALGSLLVFSSTDTSSPEDQKSKQKSKSSHSKEKT------------------DKITQ 247

  Fly   262 KPKKMSSDSE----------EAATTSKKSRQRRSKSESEA-DSDYEAPAAEEEEEEERKSSGDEE 315
            :|...||.|.          |.::.|....|:.:.|:|.: :|.::....:|....:..:|.||:
Zfish   248 RPSGSSSLSRWLTAASSHVPEVSSMSALKTQKSALSKSTSKNSSFKRKRGDEMPLNDVSASEDED 312

  Fly   316 EAANSSDSEVMPQRKRRRKKSESDKGSSDFEPEEKQKKKGR---KRIKKTSSGESDG----DGDD 373
            |.    ||:|             |..|.|.:.|::....|.   |.|:.......|.    .|..
Zfish   313 EI----DSDV-------------DSMSDDQDSEDEDSISGTLQDKIIQFLQDASLDELALISGCS 360

  Fly   374 DKQKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEIN-------- 430
            .|:..|...:|.....||:        ||:                 |.|...:.|:        
Zfish   361 IKKAQKIISLRPFNTWKDV--------KEQ-----------------FFKDNGLSIDLVHGCKVV 400

  Fly   431 ----ELVLDFDEESKK----------ALLQVDKGLLK---------KLKPHQVAGVKFMWDACFE 472
                ::|||.....:|          .:::...|.:|         ||:.:|:.|:|::      
Zfish   401 LKERQVVLDLMGRCEKIAQKMTKDVTQVIEAGMGSIKQPKVLNSNLKLQAYQLIGLKWL------ 459

  Fly   473 TLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRV-LIISPLSTVNNWAREFTS 536
            .|....:..|   |||..||||||:|.:    ..|.:....|:... ||..|.||::||.||...
Zfish   460 ILLHQHKLSG---ILADEMGLGKTIQAI----AFLAHLYEKGIKGPHLITVPSSTLDNWVRELGL 517

  Fly   537 WMKFANRNDIEVY----DISRY--KDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKK 595
            |.....   :.:|    :..:|  :|..|.:...|       :.:..|::  .:.|:..:.|.:|
Zfish   518 WCPSLK---VLIYYGSVEDRKYLRQDILTGLIDFN-------IIVSTYNL--TIGNDHDRSLFRK 570

  Fly   596 QREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQF 660
            .:.:           ..|.||||:|||..:...:.:..:..:.|::||||||||||.|...::.|
Zfish   571 LKLK-----------YAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTGTPLQNNLLELMSLLNF 624

  Fly   661 VKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPP 725
            :.|::..:....:::..:       |.|:|.:....|.|......:::..|.||..|.:...|||
Zfish   625 IMPSMFSSSTSQISKMFS-------TRSSEEESSFHKDRIAQARLIMKPFILRRVKSEVLKELPP 682

  Fly   726 KHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVI 790
            |.|.:....:|:.|.|||.......::...||    ...|......||::..||:..|       
Zfish   683 KMEKIEMCPMSDAQHKLYDILFKRLKKTPNGD----KRELCNVMMQLRKMANHPLLHR------- 736

  Fly   791 AKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNAGGG 855
                                             :.:.||.    |||.|..:.|..|..      
Zfish   737 ---------------------------------QYYTSDK----LAAMSKAMLKEPTHY------ 758

  Fly   856 DSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEERELNN-----------------VHHSPKLLIL 903
            |:|..|           :|:|      ...:.:.||:|                 :..|.|..:|
Zfish   759 DADPAL-----------IQED------MEVMSDFELHNLCREYSSISGFQLEKALILDSGKFALL 806

  Fly   904 LRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDG 968
            .:.|.:.:..||::::|||....||::|..|..:|                      ..|.||||
Zfish   807 TKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLD----------------------HQYVRLDG 849

  Fly   969 SCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYR 1033
            |..:.:|..:..::|  ||....:||:||||||.||||.:||.|::.|:..||.:|.|:..|.:|
Zfish   850 STPMAERIGLIDKYN--TNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHR 912

  Fly  1034 FGQIKPCYIYRLIAMGTME 1052
            .||.:...:.:||:..::|
Zfish   913 MGQTRTVQVIKLISKDSIE 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 60/335 (18%)
HepA <382..1071 CDD:440319 168/726 (23%)
DEXHc_ATRX 455..699 CDD:350826 63/250 (25%)
smarcad1aNP_001018610.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..76 14/58 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..177 17/60 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..333 29/150 (19%)
ComEA <348..>381 CDD:441164 7/40 (18%)
HepA <439..944 CDD:440319 154/631 (24%)
DEGH box 579..582 2/2 (100%)

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