DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and CHD7

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:XP_011515855.1 Gene:CHD7 / 55636 HGNCID:20626 Length:3027 Species:Homo sapiens


Alignment Length:1314 Identity:285/1314 - (21%)
Similarity:479/1314 - (36%) Gaps:426/1314 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SSANDEEKEPVCKIRIVPLEKLLASPKTKERPSRGSQQKNVTIND---SSDEEPLKGSKLVLPAR 142
            |..|..:|.||.:..  |.|..|..|........|...:.|..:|   |.:::|.:        :
Human   543 SPQNTPQKVPVHQHS--PSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSIEQQPQQ--------K 597

  Fly   143 KSRNKNASIIELSDSE---------EVDEEE---ESLLVAIPLPKEAQQTKPEKNSSKASKESIE 195
            |.:.||..|:....|:         .||.:|   .||       ..:|:.|.:|..|||.|:..|
Human   598 KKKKKNNHIVAEDPSKGFGKDDFPGGVDNQELNRNSL-------DGSQEEKKKKKRSKAKKDPKE 655

  Fly   196 ----KRQKAQKEATTSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCVVRLKRVSLPK 256
                |.:|..||..|..|..|                          |..||.   :..:.:.||
Human   656 PKEPKEKKEPKEPKTPKAPKI--------------------------PKEPKE---KKAKTATPK 691

  Fly   257 TKPAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYE-----APAAEEEEE---EERKSSGD 313
            .|.::|......|||.:|.   |.:..:.|:|...:||.:     :|..||:|:   ::|:||  
Human   692 PKSSKKSSNKKPDSEASAL---KKKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQKRRSS-- 751

  Fly   314 EEEAANSSDSEVMPQRKRRRKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSGESDGDGDDD---- 374
                         .|.||:|...:.:...||.|.::.. ..||.....||..|.....|.:    
Human   752 -------------RQVKRKRYTEDLEFKISDEEADDAD-AAGRDSPSNTSQSEQQESVDAEGPVV 802

  Fly   375 ----------KQKNKRKHI---RKIIKTKDLD-LTTKEAAKEEDDRRKRIEDRQKLY------NR 419
                      |||...:.:   ...:|.|:.. |..:.|:.|:.::.|||:.:.|.:      |:
Human   803 EKIMSSRSVKKQKESGEEVEIEEFYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNK 867

  Fly   420 IFVKSES-------VEINELV----------------------LDFDEESKKALLQVDKGLLK-- 453
            ...:.|.       ||::.::                      |.:::.:.:....:|:..::  
Human   868 FLSEIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEF 932

  Fly   454 ----------------------------------KLKPHQVAGVK---FMWDACFETLKESQEKP 481
                                              ||:.:|:.||.   |.|...           
Human   933 EKLMSREPETERVERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYNM----------- 986

  Fly   482 GSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGV-DRVLIISPLSTVNNWAREFTSWMKF----- 540
             ..||||..||||||:|.:|..:.:.:.    |: ...|:|:||||:.||.|||.:|.:.     
Human   987 -RNCILADEMGLGKTIQSITFLYEIYLK----GIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046

  Fly   541 ----ANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLM 601
                |:|..|::|:: .:||...|:.|.:            |..:.|:..              .
Human  1047 HGSQASRRTIQLYEM-YFKDPQGRVIKGS------------YKFHAIITT--------------F 1084

  Fly   602 QALVDPGPDL-------VVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQ 659
            :.::...|:|       ||.||.|.|||....:.:.:..|..:.:::||||||||.:.|.:.::.
Human  1085 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLH 1149

  Fly   660 FVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLP 724
            |::|:...:...:|..|.:..|..|...               |..:|:..:.||....:...|.
Human  1150 FLEPSRFPSETTFMQEFGDLKTEEQVQK---------------LQAILKPMMLRRLKEDVEKNLA 1199

  Fly   725 PKHEYVVYTTLSELQQKLYGYYMT---THREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNS 786
            ||.|.::...|:.:|:|.|...:.   |...:.||.  .....|.....:||:...||..:....
Human  1200 PKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ--ANVPNLLNTMMELRKCCNHPYLINGAE 1262

  Fly   787 DNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGN 851
            :.::                                 |.||                  :|.|..
Human  1263 EKIL---------------------------------EEFK------------------ETHNAE 1276

  Fly   852 AGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIGDK 916
            :    .|..|:.:                             :..:.||:::.:||.:.:|.|.:
Human  1277 S----PDFQLQAM-----------------------------IQAAGKLVLIDKLLPKLKAGGHR 1308

  Fly   917 LLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQ 981
            :|:|||.::.||::|.:|.     .:.|.:|                 |:||......|:|...:
Human  1309 VLIFSQMVRCLDILEDYLI-----QRRYPYE-----------------RIDGRVRGNLRQAAIDR 1351

  Fly   982 FNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLI 1046
            |:...:.|. :||:.||||||||||.||:..:|||..|||.:|.|:..|.:|.||.|...|||||
Human  1352 FSKPDSDRF-VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLI 1415

  Fly  1047 AMGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQTD-LMELYSYELKPSTEREMPILPKDRLFA 1110
            ...:.|::::::...|....|.|:  |.:|...|.|: :.:|...|::       .:|.|....|
Human  1416 TRNSYEREMFDKASLKLGLDKAVL--QSMSGRENATNGVQQLSKKEIE-------DLLRKGAYGA 1471

  Fly  1111 EILTEHEKLIFKYHEHDSLLEQEEHENLTEEERKSAWAEYEAEKTRTVQASQYMSYDRNAFGNQV 1175
            .:..|.|...|...:.|.:|.:..|....|.|.|.:                             
Human  1472 LMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGS----------------------------- 1507

  Fly  1176 MGQFGNASGSVTSNKIFGFRSDILLQLLNM------KISKDHQELN-QNQVIQLVPTYLQQ--LY 1231
              .|..||...:.|     |:||.|...|.      |...|...|| :|.::...|...:|  ||
Human  1508 --TFAKASFVASGN-----RTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLY 1565

  Fly  1232 NEMNNGDPTMYKDL 1245
            :.:...:...:.||
Human  1566 SAVKEDELMEFSDL 1579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 71/387 (18%)
HepA <382..1071 CDD:440319 169/786 (22%)
DEXHc_ATRX 455..699 CDD:350826 67/263 (25%)
CHD7XP_011515855.1 Atrophin-1 197..>578 CDD:460830 10/36 (28%)
CD1_tandem_CHD5-9_like 796..861 CDD:349315 13/64 (20%)
CD2_tandem_CHD5-9_like 879..936 CDD:349310 4/56 (7%)
PLN03142 967..>1566 CDD:215601 189/810 (23%)
BRK 2593..2634 CDD:462196
BRK 2672..2716 CDD:197800
Blue background indicates that the domain is not in the aligned region.

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