Protein Alignment XNP and lds

DIOPT Version :9

• Sequence 1: NP_651398.1
• Gene: XNP / 43080
• FlyBaseID: FBgn0039338
• Length: 1311
• Species: Drosophila melanogaster
• Sequence 2: NP_524850.2
• Gene: lds / 45894
• FlyBaseID: FBgn0002542
• Length: 1061
• Species: Drosophila melanogaster
• Alignment Length: 1256
• Identity: 278/1256 - (22%)
• Similarity: 460/1256 - (36%)
• Gaps: 397/1256 - (31%)

  Fly    20 DDS--NSSSVSR-RESATESKSASESESSPPRS-----NTKQSRTHKNVKASGKATVSSSSDSDQ 76
            :||  |:||:.| |:|:..|||:..|:||.|.|     :..||...:: ::|..|....|.:||.
  Fly    14 EDSVVNNSSLGRSRKSSRLSKSSRLSKSSRPSSAGVVIDETQSEEEES-QSSETAESEKSDESDN 77

  Fly    77 AVANSSANDEEKEPVCKIRIVPLEKLLASPKTKERPS-RGSQQKNVTI-NDSSDEEPLKGSKLVL 139
            :..:..:.|.|.:.|                   ||| |.:::|.:.| :||.|||.....:.:.
  Fly    78 SQNSQESEDSEDDSV-------------------RPSARNTKRKPLGIPSDSEDEEDELEQRALS 123

  Fly   140 PARKSRNKNASIIELSDS----EEVDEEEESLLVAIPLPKEAQQTKPEKNSSKASKESIEKRQKA 200
            |:.:.........:|||.    |..||.:|.       |.||           .:.|::..|.
  Fly   124 PSTRMSITGVRPQDLSDDDSEIEYSDEVQEG-------PTEA-----------PTAEAVVPRY-- 168

  Fly   201 QKEATTSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCVVRLKRVSLPKTKPAQKPKK 265
                ||..|..|::...:..|:..||....:|.|                .|.:...|  :.|.:
  Fly   169 ----TTQFAGNIQNDLHSTIGAADSEVLDDSSGS----------------DVLILSNK--ETPIE 211

  Fly   266 MSSDSEEAATTSKKSR-----QRRSKSESEADSDYEAPAAEEEEEEERKSSGDEEEAANSSDSEV 325
            :.|.:::.|||:|::.     :|.|||.|...|    ..|...:..:..|....:.......|..
  Fly   212 ILSSTDDDATTNKENMSGPPFERPSKSLSPRSS----AGASVVKTSKNLSQPTIQAVLKQKTSPA 272

  Fly   326 MPQRKRRRKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSGESDGDGDDDKQKNKRKHIRKIIKTK 390
            .|  :|.|.|||..|..|....:|:.:|...||: :.|..|...:....|..:|...|.|.|
  Fly   273 AP--RRSRIKSEDQKVVSQVVYDEEMRKLAEKRV-QVSDAEKLFEKVAHKLPDKGSQIMKRI--- 331

  Fly   391 DLDLTTKEAAKEE------------------------------------DDRRKRIEDRQKLY-- 417
              |...:|.|.:|                                    |:..:.:.:.:.:|
  Fly   332 --DTLRRELAMDEQWISALRVQQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAVNEIKPVYTG 394

  Fly   418 --------NRIFVKSESVEINELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFM-WDACFET 473
                    |:..:..||::...:.|: |....:.|.:...||...|..||...:.:| |
  Fly   395 AQGMATFNNQKALTLESLKDLHVSLE-DLPGPEVLAEDPVGLKVSLMNHQKHALAWMSW------ 452

  Fly   474 LKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLV------------------------------ 508
               .:.|...|.|||..|||||||   |:..::|.
  Fly   453 ---RERKLPRGGILADDMGLGKTL---TMISSVLACKNGQEMSEGKDESSDSDSEDDKNKKRKSV 511

  Fly   509 ---------NTRRTGVDRVLIISPLSTVNNWAREFTSWMKFANRNDIEVYDISRYK--------- 555
                     :|||.|   .|::.|.|.:..|..|..|             .:||.|
  Fly   512 TGWKSKGRKDTRRGG---TLVVCPASLLRQWESEVES-------------KVSRQKLTVCVHHGN 560

  Fly   556 DKPTRIFKLNEWFNEGGVCILGYDM----YRILANEKAK-----GLRKKQREQLMQALVDPGPDL 611
            ::.|:           |..:..||:    |:|:|.|...     |::.::
  Fly   561 NRETK-----------GKYLRDYDIVVTTYQIVAREHKSLSAVFGVKWRR--------------- 599

  Fly   612 VVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNL---LGTYKEYM 673
            ::.||.|:::|.|:..|.||..:|.|.|..|||||:||...:.|.:::|::.:.   |.|:|:::
  Fly   600 IILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWI 664

  Fly   674 NRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAP-----YLPPKHEYVVYT 733
            :   |....||                :.|:.|::..:.||..:.|..     .||.|...::..
  Fly   665 D---NKSAGGQ----------------NRLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEI 710

  Fly   734 TLSELQQKLYGYYMTTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSND 798
            :|.:.:..:|...||..|            .||..|...|.......|.|  ||   |.:...|.
  Fly   711 SLDKEEMNVYQTVMTYSR------------TLFAQFLHQRAERETDFNYR--SD---ANKPTYNQ 758

  Fly   799 DSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRK----------------- 846
            ..|..|                   ..:|.....:.:|.|..:||...
  Fly   759 IKDPNG-------------------AYYKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGL 804

  Fly   847 -------TRNGNAGGGDSDSD---LEMLGGLG----------GGSSVQK--DD-----PSEWWKP 884
                   ..:...|...||||   :::|..|.          |..||..  ||     |.|   .
  Fly   805 IDAMLDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDGQQSVANAGDDGPPLLPDE---A 866

  Fly   885 FVEERELN---------NVHH-SPKLLILLRLLQQ--CEAIGDKLLVFSQSLQSLDVIEHFLSLV 937
            .:.:...|         |:|. |.|:.:::::|:.  .::..||.:|.||....||::...||
  Fly   867 RIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLS-- 929

  Fly   938 DSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGL 1002
                                ..|.....|:|:..|:.|:.:..:||:..| :.|:.|:|..|||:
  Fly   930 --------------------KDGVATLSLNGTIPVKNRQDIVNEFNDRNN-QKRVLLLSLTAGGV 973

  Fly  1003 GINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAK 1067
            |:||:.||.:::.|:.|||..:.|:..|:||.||.|...||:.:.:.|:||::...|..|...|.
  Fly   974 GLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLAD 1038

  Fly  1068 RVIDEQQISRHYNQTDLMELY 1088
            .|:...::|......||..|:
  Fly  1039 GVLTGAKVSSKLTIDDLKGLF 1059

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
XNP	NP_651398.1	DTHCT	258..335	CDD:285332	19/81 (23%)
		SNF2_N	458..779	CDD:278600	83/386 (22%)
		DEXDc	483..646	CDD:238005	49/219 (22%)
		Helicase_C	913..1035	CDD:278689	36/121 (30%)
lds	NP_524850.2	SNF2_N	442..805	CDD:278600	96/471 (20%)
		DEXDc	459..634	CDD:238005	49/219 (22%)
		HELICc	885..1014	CDD:238034	43/151 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467225
Domainoid	1	1.000	47	1.000	Domainoid score	I705
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840