DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and Mi-2

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_001014591.1 Gene:Mi-2 / 40170 FlyBaseID:FBgn0262519 Length:1983 Species:Drosophila melanogaster


Alignment Length:1578 Identity:310/1578 - (19%)
Similarity:500/1578 - (31%) Gaps:637/1578 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ASESESSPPRSNTKQSRTHKNVKASGKATVSSSSDSDQAVANSSANDEEKEPVCKIRIVPLEKLL 103
            |||.|      |....:..:..:.........|:||| |....:.|||:.:              
  Fly     2 ASEEE------NDDNFQEEEEAQEDNAPAAELSNDSD-APLKPNQNDEDDD-------------- 45

  Fly   104 ASPKTKERPSRGSQQKNVTINDSSDEEPLKGSKLVLPARKSRNKNASIIELSDSEEVDEEEESLL 168
            ..|:...|..:|.::|.     ...||  ||.|     :|.|.||.|   ..||:.|..:||   
  Fly    46 YDPEDSRRKKKGKKRKT-----RKGEE--KGRK-----KKKRKKNES---EEDSDFVQHDEE--- 92

  Fly   169 VAIPLP-------KEAQQTKPEKNSSKASKESIEK------------------------------ 196
            |..|..       ||.:|...||.|:.:...|:|.                              
  Fly    93 VEYPSTSKRGRKRKEEKQAAKEKESASSGMPSVEDVCSAFSVCNVEIEYSEEELQSLTTYKAFMH 157

  Fly   197 --RQKAQKE----------------------------------ATTSSARAIRSVNGTRRGSLSS 225
              |...|||                                  .:..||...|||.|.......|
  Fly   158 HVRPILQKENPKIAAPKLVMLVAAKWREFCESNPHIQQEGGAAGSGGSAGQARSVTGDEPEEPRS 222

  Fly   226 ERSSR---------------ASSSRAESPPRPKRCVVRLK------RVSLPKTKPAQKPKKMSSD 269
            .||||               ......|..||.||.....|      :|...|.|...|.|:.|||
  Fly   223 SRSSRNEKPDDIYEEAVEEEEEEEEEEKKPRRKRSGRGKKGRRPSGKVPTLKIKLLGKRKRDSSD 287

  Fly   270 SEEAATTSKKS------RQRRSKSESEAD---------SDYEAPAAEEE---------------- 303
            .|:.|:.:.:.      .:...||:..||         :|..||||:::                
  Fly   288 EEQDASGASERDSDLEFERMLQKSDDSADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKIG 352

  Fly   304 ---------EEEERKSSGDEEEAANSSDSEVM----------------------------PQRKR 331
                     ::.:....|::.|..:....||.                            |:.|.
  Fly   353 NKFKKKNKLKKTKNFPEGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKW 417

  Fly   332 RRKKSESDKGSSDFEPEEKQKK------------------------------------------- 353
            .....|:|.|:::.|.:::.::                                           
  Fly   418 SCPHCEADGGAAEEEDDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRC 482

  Fly   354 -------KGRKRI------KKTSSGESDGDGDDDKQKNKRKH----------------------- 382
                   |..|.|      :....|.|...|..:.....|::                       
  Fly   483 SCPPLTGKAEKIITWRWAQRSNDDGPSTSKGSKNSNSRVREYFIKWHNMSYWHCEWVPEVQLDVH 547

  Fly   383 ----IRKIIKTKDLDLTTK--EAAKEEDDRRKRI------------EDRQKLYNRIF---VKSES 426
                ||...:..|::...|  |:..|.|.|.|||            :|.:.|..|.:   ||.|.
  Fly   548 HPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERFYKNGVKPEW 612

  Fly   427 VEINELV------------------LDFD------------------------------------ 437
            :.:..::                  |.:|                                    
  Fly   613 LIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSR 677

  Fly   438 ----EESKKALLQVD--------------------------------KGLLKKLKPHQVAGV--- 463
                ::.:|:.|:|:                                :|...:|.|:|:.|:   
  Fly   678 SKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWL 742

  Fly   464 KFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVN 528
            ::.|....:|            |||..||||||:|.||..::|.......|  ..|:..||||:.
  Fly   743 RYSWGQGIDT------------ILADEMGLGKTIQTVTFLYSLYKEGHCRG--PFLVAVPLSTLV 793

  Fly   529 NWAREFTSWMKFANRNDIEVYDISRYKDKPTR-IFKLNEW-FNEGGVCILGYDMYRILANEKAKG 591
            ||.|||..|..       :.|.|:...||.:| :.:.||. |.||  .|.|..:.|:...:....
  Fly   794 NWEREFELWAP-------DFYCITYIGDKDSRAVIRENELSFEEG--AIRGSKVSRLRTTQYKFN 849

  Fly   592 LRKKQREQL-MQALVDPGPD--LVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLRE 653
            :.....|.: |.|......|  ::|.||.|.||:.::...:.:.......:::||||||||||.|
  Fly   850 VLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEE 914

  Fly   654 YYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTD-STERDLRLMKHRSHILHKLLEGCIQRRDYS 717
            .:.::.|:..:.....:.:         .|::.| |.|..::.       ||::|...:.||..:
  Fly   915 LFHLLNFLSRDKFNDLQAF---------QGEFADVSKEEQVKR-------LHEMLGPHMLRRLKT 963

  Fly   718 VLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNL 782
            .:...:|.|.|::|...||.:|:|.|.:.:|.:.|.......|....|.....||::...||.  
  Fly   964 DVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPY-- 1026

  Fly   783 RVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKT 847
                                                      .|.|.|..:..||          
  Fly  1027 ------------------------------------------LFPSAAEEATTAA---------- 1039

  Fly   848 RNGNAGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSP-KLLILLRLLQQCE 911
                             |||                     .|:|::..:. ||::|.::|:|.:
  Fly  1040 -----------------GGL---------------------YEINSLTKAAGKLVLLSKMLKQLK 1066

  Fly   912 AIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQRE 976
            |...::|:|||..:.||::|.||            ||:  .:|        |.|:||..:...|:
  Fly  1067 AQNHRVLIFSQMTKMLDILEDFL------------EGE--QYK--------YERIDGGITGTLRQ 1109

  Fly   977 AMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCY 1041
            ....:| |....:..:||:|||||||||||..|:.|:|:|..|||.:|.|:..|.:|.||.....
  Fly  1110 EAIDRF-NAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVM 1173

  Fly  1042 IYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQT-----DLMELYSYELKPSTEREMP 1101
            |||.:...::|::|.:....|......|:......:..|.|     |::...:.:|....::|..
  Fly  1174 IYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKEDDKEEA 1238

  Fly  1102 ILPKDRLFAEILTEHEKLIFKYHEHDSLLEQEEHENLTEEERKSAWAEYEAEKTRTVQASQYMSY 1166
            |...|:..||:|....:.|                     |.|.:||                  
  Fly  1239 IHYDDKAVAELLDRTNRGI---------------------EEKESWA------------------ 1264

  Fly  1167 DRNAFGNQVMGQFGNASGSVTSNKIFGFRSDILLQLLNMKISKDHQELNQNQVIQLVPTYLQQLY 1231
                  |:.:..|..||.:                      :|:.:|..:.::|:          
  Fly  1265 ------NEYLSSFKVASYA----------------------TKEEEEEEETEIIK---------- 1291

  Fly  1232 NEMNNGDPTMYKDLLNLH 1249
            .:..|.||..:..||..|
  Fly  1292 QDAENSDPAYWVKLLRHH 1309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 90/638 (14%)
HepA <382..1071 CDD:440319 183/832 (22%)
DEXHc_ATRX 455..699 CDD:350826 70/252 (28%)
Mi-2NP_001014591.1 CHDNT 138..191 CDD:462357 4/52 (8%)
TNG2 <282..422 CDD:227367 21/139 (15%)
PHD1_CHD_II 380..422 CDD:277006 4/41 (10%)
PHD2_CHD_II 440..482 CDD:277007 0/41 (0%)
CD1_tandem_CHD3-4_like 487..557 CDD:349314 9/69 (13%)
CD2_tandem_CHD3-4_like 610..664 CDD:349309 3/53 (6%)
PLN03142 720..>1234 CDD:215601 165/667 (25%)
DUF1087 <1292..1334 CDD:461922 6/18 (33%)
CHDII_SANT-like 1380..1517 CDD:461920
CHDCT2 1757..1902 CDD:462358
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.