DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and ADD1

DIOPT Version :9

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_725094.1 Gene:ADD1 / 36278 FlyBaseID:FBgn0026573 Length:1199 Species:Drosophila melanogaster


Alignment Length:845 Identity:160/845 - (18%)
Similarity:287/845 - (33%) Gaps:267/845 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 RSNTKQSRTHKNVKASGKATVSSSSDSDQAVANSSANDEEKEPVCKIRIVPLEKLLASPKTKERP 112
            |....|.:...:::..|....::|.::.|..|:..|:|:|..   :|.||       .|||    
  Fly   595 RFKNLQEKCLVDMREKGFKNDANSLENGQLAADKQASDDEDN---EIEIV-------EPKT---- 645

  Fly   113 SRGSQQKNVTI-NDSSDEEPLKGSKLVLPARKSRNKNASIIELSDSEEVDEEEESLLVAIPLPKE 176
                  ..:|| :|:.|:.|                       |.|....:|:         |:|
  Fly   646 ------DTITIDSDNEDDMP-----------------------STSTATQQEQ---------PQE 672

  Fly   177 AQQTKPEKNSSKASKESIEKRQKAQKEATTSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPR 241
            ....|....:|:|||:.:::..:|..:....|:..:.|:       |..|.:..||..:..||.:
  Fly   673 TAIMKITSVTSEASKKELQENNQADIDVAAFSSTILASL-------LEVEVNEGASEPKPVSPGQ 730

  Fly   242 PKRCVVRLKRVSLPKTKPAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEE 306
            .|:          |:.|...||.......|.    .:....::|.::.:.....:...||:|.|.
  Fly   731 KKQ----------PRKKTTNKPNPALLQLER----QRMEDMKKSDAKLKMKVMVKLKRAEDEFEV 781

  Fly   307 ERKSSGD----EEEAANSSDSEVMPQRKRRRKKSE----SDKGSSDFEPEEKQKKKGRKRIKKTS 363
            .||...|    :|.|....||:......:.:|.||    |:||||                .|..
  Fly   782 ARKWVEDMKQGQELATKIKDSKAATPSNKTQKPSENLKISEKGSS----------------AKKE 830

  Fly   364 SGESDGDGDDDKQKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVE 428
            |.:..|:||.:..|||.| |..|:|.         |.|      .:|.:.:||      .:|.|:
  Fly   831 STKQHGEGDKENTKNKEK-IGDILKA---------AIK------AKIGENEKL------MAEDVQ 873

  Fly   429 --INELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCM 491
              ::||:.:.|:|       :||..|...:|              ||.|:|..:.||        
  Fly   874 LPVDELLTEKDKE-------LDKETLTSTEP--------------ETNKKSGTEKGS-------- 909

  Fly   492 GLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSWMKFANRNDIEVYDISRYKD 556
                                    |:.   ..|:..||        :|..::::.:....|..|.
  Fly   910 ------------------------DKK---QHLTKENN--------VKGESKDESKTDQKSDCKK 939

  Fly   557 KP----TRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEG 617
            .|    |.|.:..|..:|     .||.     .:||.:|    ..|.:........|.|:...|.
  Fly   940 GPDSECTEIEEETEMLSE-----KGYG-----GSEKEQG----DTENMEDETSSERPTLIGEIEK 990

  Fly   618 HLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITN 682
            :|||..|...|:...:.....:.|...:|......:....::..:..|..:.::..|....|:..
  Fly   991 NLLKEGKEESSEKFDKEVEPSKDVGKDSPTTQGKGQDSDKLKNARAGLKNSTQDASNTVEPPVAA 1055

  Fly   683 GQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYM 747
            ....|.:.                :...|:|.|.:    .|..|.:.::...|.|:         
  Fly  1056 SNENDQSS----------------VGELIERMDVT----ELDEKPKELLDCALDEV--------- 1091

  Fly   748 TTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEG--FICD-- 808
                      :..:|..|..|.:||.:        .:.|.:|:..:...::::|::.  ||.:  
  Fly  1092 ----------IPMEGIELSDDTEDLIK--------ALGSPSVLPSQNTKDNETDLDANDFIGNLP 1138

  Fly   809 -ETDEDEAASNSSDSCETFKSDASMSGLA-------ASSGKVKKRKTRNGNAGGGDSDSDLEMLG 865
             ||.|........|.|:..|:    :|::       |.:|..:...|...:....|..:..|::|
  Fly  1139 LETTEPPEILLKEDECKVEKT----TGISQVGAPSPAENGDTEMESTLEASDSAPDEFATAEIVG 1199

  Fly   866  865
              Fly  1200  1199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 DTHCT 258..335 CDD:285332 16/80 (20%)
SNF2_N 458..779 CDD:278600 50/324 (15%)
DEXDc 483..646 CDD:238005 28/166 (17%)
Helicase_C 913..1035 CDD:278689
ADD1NP_725094.1 ADDz_ATRX 62..164 CDD:277252
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1015
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4866
SonicParanoid 00.000 Not matched by this tool.
21.930

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