DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and okr

DIOPT Version :9

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster


Alignment Length:988 Identity:247/988 - (25%)
Similarity:411/988 - (41%) Gaps:315/988 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 LKRVSLPKTKPAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEEERKSSGD 313
            ::|...|..:...:|:...|.:......:|:|.|:.               .|.|:|.:|:..|.
  Fly     1 MRRSLAPSQRGPLRPESRHSFTPPLLKKNKRSCQQE---------------LEREQELDRRRLGA 50

  Fly   314 EEEAANSSDSEVMPQRKRRRKKSESDKG------------SSDFEPEEKQKKKGRKRIKKTSSGE 366
            ..:|:|:|:   :|...|....||.:..            ..::.|:     .|.||:       
  Fly    51 LRDASNTSE---LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPD-----YGGKRV------- 100

  Fly   367 SDGDGDDDKQKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEINE 431
                          ..:|:.|..:.|                               .:.:..|.
  Fly   101 --------------LGVRRCISRRPL-------------------------------HDPMACNA 120

  Fly   432 LVL----DFDEESK------KALLQ--VDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPG-- 482
            |||    .:.|..:      |.|:.  ||..|...|:|||..||:||:: |.|      .|.|  
  Fly   121 LVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYE-CVE------GKRGNF 178

  Fly   483 SGCILAHCMGLGKTLQVVTLSHTLLVNTRRTG------VDRVLIISPLSTVNNWAREFTSWMK-- 539
            :|||:|..||||||||.|||..|||    |.|      :::.:::||.|.|.||.:|||.|:.  
  Fly   179 NGCIMADEMGLGKTLQCVTLVWTLL----RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGR 239

  Fly   540 --------FANRNDIEVYDISRYKDKPTRIFKLNEWFNEGG--VCILGYDMYRILANEKAKGLRK 594
                    ....|.|..  :.::.....|:          |  |.::.|:.:||.|....|    
  Fly   240 LLCLPMEGGTKENTIRA--LEQFSMTSARL----------GTPVLLISYETFRIYAEILCK---- 288

  Fly   595 KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQ 659
                      .:.|  :|:|||||.|||......:|:..::||||::|:|||:||:|.|||.::.
  Fly   289 ----------YEVG--MVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVN 341

  Fly   660 FVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLP 724
            ||.|.:|||...:...|.:.|..||.|||||::.:....::..|..|::.||.||...:|..|||
  Fly   342 FVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLP 406

  Fly   725 PKHEYVVYTTLSELQQKLYGYYMTTHR-EQSGGDVVGKGA-RLFQDFQDLRRIWTHPMNLRVNSD 787
            .|.|.|:...|:.:|.:||..::.:.: .:|..|...|.: ....|...|::|.:||        
  Fly   407 VKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHP-------- 463

  Fly   788 NVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNA 852
            ::|.::|.:.:    :||   |..::...||                                  
  Fly   464 DLIYEKLTARE----KGF---ENSQNVLPSN---------------------------------- 487

  Fly   853 GGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIG-DK 916
                                         :||    ::| |...|.|.::|..:|....|.| ||
  Fly   488 -----------------------------YKP----KDL-NPELSGKFMLLDFMLAAIRAEGNDK 518

  Fly   917 LLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQ 981
            :::.|...|:||:.|..     :..:.|.|                 .||||:.|:::|..:..:
  Fly   519 VVLISNYTQTLDLFEQL-----ARKRKYGF-----------------VRLDGTMSIKKRSKVVDR 561

  Fly   982 FNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLI 1046
            ||: ....:.||::|::|||.|:||:.|||:.:||..|||::|.|::.||:|.||.||||||||:
  Fly   562 FND-PESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLV 625

  Fly  1047 AMGTMEQKVYERQVAKQATAKRVID-EQQISRHYNQTDLMELYSY-------------------- 1090
            |.|::|:|:.:||..|::.:..:|| .:...:|:.:.||.:|:::                    
  Fly   626 ASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQN 690

  Fly  1091 -ELKP-----------------STEREMPILPKDRLFAEILTEHEKLIFKYHEHDSLLE-----Q 1132
             ::||                 |..|.:|    |.:.|:...:.:.:.|.:|......|     :
  Fly   691 IQMKPPPEDTDCTSHLSQWYHCSNNRGLP----DNILAQAWMDCKCVSFVFHHRSQAQEIVPSAE 751

  Fly  1133 EEHENLTEEERKS 1145
            ||..:..||:.:|
  Fly   752 EEATDQPEEKPES 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 DTHCT 258..335 CDD:285332 15/76 (20%)
SNF2_N 458..779 CDD:278600 113/342 (33%)
DEXDc 483..646 CDD:238005 57/180 (32%)
Helicase_C 913..1035 CDD:278689 40/122 (33%)
okrNP_476661.1 SNF2_N 159..466 CDD:278600 115/353 (33%)
DEXDc 179..328 CDD:238005 57/180 (32%)
HELICc 493..622 CDD:238034 53/152 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467237
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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