DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and okr

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster


Alignment Length:988 Identity:247/988 - (25%)
Similarity:411/988 - (41%) Gaps:315/988 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 LKRVSLPKTKPAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEEERKSSGD 313
            ::|...|..:...:|:...|.:......:|:|.|:.               .|.|:|.:|:..|.
  Fly     1 MRRSLAPSQRGPLRPESRHSFTPPLLKKNKRSCQQE---------------LEREQELDRRRLGA 50

  Fly   314 EEEAANSSDSEVMPQRKRRRKKSESDKG------------SSDFEPEEKQKKKGRKRIKKTSSGE 366
            ..:|:|:|:   :|...|....||.:..            ..::.|:     .|.||:       
  Fly    51 LRDASNTSE---LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPD-----YGGKRV------- 100

  Fly   367 SDGDGDDDKQKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEINE 431
                          ..:|:.|..:.|                               .:.:..|.
  Fly   101 --------------LGVRRCISRRPL-------------------------------HDPMACNA 120

  Fly   432 LVL----DFDEESK------KALLQ--VDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPG-- 482
            |||    .:.|..:      |.|:.  ||..|...|:|||..||:||:: |.|      .|.|  
  Fly   121 LVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYE-CVE------GKRGNF 178

  Fly   483 SGCILAHCMGLGKTLQVVTLSHTLLVNTRRTG------VDRVLIISPLSTVNNWAREFTSWMK-- 539
            :|||:|..||||||||.|||..|||    |.|      :::.:::||.|.|.||.:|||.|:.  
  Fly   179 NGCIMADEMGLGKTLQCVTLVWTLL----RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGR 239

  Fly   540 --------FANRNDIEVYDISRYKDKPTRIFKLNEWFNEGG--VCILGYDMYRILANEKAKGLRK 594
                    ....|.|..  :.::.....|:          |  |.::.|:.:||.|....|    
  Fly   240 LLCLPMEGGTKENTIRA--LEQFSMTSARL----------GTPVLLISYETFRIYAEILCK---- 288

  Fly   595 KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQ 659
                      .:.|  :|:|||||.|||......:|:..::||||::|:|||:||:|.|||.::.
  Fly   289 ----------YEVG--MVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVN 341

  Fly   660 FVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLP 724
            ||.|.:|||...:...|.:.|..||.|||||::.:....::..|..|::.||.||...:|..|||
  Fly   342 FVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLP 406

  Fly   725 PKHEYVVYTTLSELQQKLYGYYMTTHR-EQSGGDVVGKGA-RLFQDFQDLRRIWTHPMNLRVNSD 787
            .|.|.|:...|:.:|.:||..::.:.: .:|..|...|.: ....|...|::|.:||        
  Fly   407 VKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHP-------- 463

  Fly   788 NVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNA 852
            ::|.::|.:.:    :||   |..::...||                                  
  Fly   464 DLIYEKLTARE----KGF---ENSQNVLPSN---------------------------------- 487

  Fly   853 GGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIG-DK 916
                                         :||    ::| |...|.|.::|..:|....|.| ||
  Fly   488 -----------------------------YKP----KDL-NPELSGKFMLLDFMLAAIRAEGNDK 518

  Fly   917 LLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQ 981
            :::.|...|:||:.|..     :..:.|.|                 .||||:.|:::|..:..:
  Fly   519 VVLISNYTQTLDLFEQL-----ARKRKYGF-----------------VRLDGTMSIKKRSKVVDR 561

  Fly   982 FNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLI 1046
            ||: ....:.||::|::|||.|:||:.|||:.:||..|||::|.|::.||:|.||.||||||||:
  Fly   562 FND-PESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLV 625

  Fly  1047 AMGTMEQKVYERQVAKQATAKRVID-EQQISRHYNQTDLMELYSY-------------------- 1090
            |.|::|:|:.:||..|::.:..:|| .:...:|:.:.||.:|:::                    
  Fly   626 ASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQN 690

  Fly  1091 -ELKP-----------------STEREMPILPKDRLFAEILTEHEKLIFKYHEHDSLLE-----Q 1132
             ::||                 |..|.:|    |.:.|:...:.:.:.|.:|......|     :
  Fly   691 IQMKPPPEDTDCTSHLSQWYHCSNNRGLP----DNILAQAWMDCKCVSFVFHHRSQAQEIVPSAE 751

  Fly  1133 EEHENLTEEERKS 1145
            ||..:..||:.:|
  Fly   752 EEATDQPEEKPES 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 39/234 (17%)
HepA <382..1071 CDD:440319 203/723 (28%)
DEXHc_ATRX 455..699 CDD:350826 92/263 (35%)
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 11/106 (10%)
HepA <156..650 CDD:440319 190/638 (30%)
DEXHc_RAD54A 156..396 CDD:350825 96/278 (35%)

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