DRSC/TRiP Functional Genomics Resources

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Protein Alignment XNP and smarca2

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:XP_073805988.1 Gene:smarca2 / 334032 ZFINID:ZDB-GENE-030131-5964 Length:1578 Species:Danio rerio


Alignment Length:1275 Identity:281/1275 - (22%)
Similarity:471/1275 - (36%) Gaps:380/1275 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SESESSPPRSNTKQSRTHKNVKASGKATVSSSSDSDQAVANSSANDEEKEPVCKIRIVPLEKLLA 104
            :.::||.|:..|:           |:...:||:.....::..|.......|:......|:.....
Zfish   250 THTQSSGPKQWTE-----------GQGAETSSTPQKLLISAPSGRPSPAPPLAPTGTQPVPSTSL 303

  Fly   105 SPKTKERPSRGSQQKNVTINDSSDEEPLKGSKLVLPARKSRNKNASIIELSDSEEVDEEEESLLV 169
            :.:.:.:|..|..|.::.|.....:      ..|.|.:|.:.        .|..|:.:|.|..|.
Zfish   304 TSQPQPQPPAGPGQPSLIIQLQQKQ------NRVTPIQKPQG--------LDPVELLQEREYRLQ 354

  Fly   170 AIPLPKEAQQTKPEKNSSKASKESIEKRQKAQKEATTSSARAIRSVNGTRRGSLSSERSSRASSS 234
            |    :.|.:.:..:|...:....:  |.||     |...:|:|.:|..|:..|......|..::
Zfish   355 A----RIAHRIQELENLPGSLPPDL--RTKA-----TVELKALRLLNFQRQLRLDVVACMRRDTT 408

  Fly   235 -----RAESPPRPKRCVVRLKRVSLPKTKPAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSD 294
                 .:::..|.||..:|..|:    |:..:|.:|:           ::.|:||.|.:...:|.
Zfish   409 LETALNSKAYKRSKRQTLREARM----TEKLEKQQKI-----------EQERKRRQKHQEYLNSI 458

  Fly   295 YEAPAAEEEEEEERKSSG-------------DEEEAANSSDSEVMPQRKRRRKKSESDKGSSDFE 346
            .:  .|::.:|..|..||             ...|.....::|.:.:.:.||..:|.::|.....
Zfish   459 LQ--HAKDFKEYHRSISGKIQKLSKAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLI 521

  Fly   347 PEE--------------------------------KQKKKGRKRIKKTSSGESDGDG-------- 371
            .::                                |:|||.||: ||..:|:::|.|        
Zfish   522 DQKKDKRLAYLLQQTDEYVANLTELVYEHKAAQAAKEKKKKRKK-KKKEAGDAEGMGAIGPDGEP 585

  Fly   372 -DDDKQKNK------RKHIRKIIKTKDLDLTTKEAA-----------------------KEEDDR 406
             |::.|.::      :....|:::..|...:::..|                       :||||.
Zfish   586 IDENSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSDFEEEDDE 650

  Fly   407 R--KRIEDRQKLYNRIFVKSESVEINELVL---------DFDEE--------SKKALLQVDKGLL 452
            .  .|.|..:|.    .:...|.|::|...         |.|:|        |.::...|...::
Zfish   651 EVVSRAESEEKK----VIDPNSDEVSETAAKHIIESAKQDVDDEYSSQAGQTSSQSYYGVAHAVI 711

  Fly   453 KK------------LKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHT 505
            ::            ||.:|:.|:::|.......|..         |||..||||||:|.:.|...
Zfish   712 ERVDKQSTFLINGTLKQYQIQGLEWMVSLYNNNLNG---------ILADEMGLGKTIQTIGLITY 767

  Fly   506 LLVNTRRTGVDRVLIISPLSTVNNWAREFTSW----MKFANRNDIEVYDISRYKDKPTRIFKLNE 566
            |:.:.|..|  ..|||.||||::||..|...|    :|.|            ||..|:....|..
Zfish   768 LMEHKRLNG--PYLIIVPLSTLSNWVYELDKWAPSIVKIA------------YKGTPSMRRSLVP 818

  Fly   567 WFNEG--GVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISK 629
            ....|  .|.|..|: |.|    |.|.:..|.|.:.|           :.||||.:||....:::
Zfish   819 QLRSGKFNVLITTYE-YII----KDKHILAKIRWKYM-----------IVDEGHRMKNHHCKLTQ 867

  Fly   630 AV-TRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLL---GTYKEYMNRFVNPIT-NGQYTDST 689
            .: |.....||::||||||||.|.|.:.::.|:.|.:.   .|::::.|.   |.. .|:..|..
Zfish   868 VLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA---PFAMTGERVDLN 929

  Fly   690 ERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLY------GYYMT 748
            |.:..|:..|   |||:|...:.||....:...||.|.|||:...:|.:|:.||      |..:|
Zfish   930 EEETILIIRR---LHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLT 991

  Fly   749 THREQSGGDVVGKGA--RLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETD 811
            ...|:   |..|||.  .|......|::|..||...: :.:...|:.|         ||      
Zfish   992 DGSEK---DKKGKGGAKTLMNTIMQLKKICNHPYMFQ-HIEESFAEHL---------GF------ 1037

  Fly   812 EDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQKD 876
                                                .||...|    .||....|          
Zfish  1038 ------------------------------------PNGIISG----PDLYRASG---------- 1052

  Fly   877 DPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNT 941
                                  |..:|.|:|.:.:|...::|:|.|....:.::|.:...     
Zfish  1053 ----------------------KFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGY----- 1090

  Fly   942 KNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINL 1006
            :|:.                 |.||||:...|.|..:.|:||. ...:..:||:||||||||:||
Zfish  1091 RNFL-----------------YLRLDGTTKSEDRAMLLKKFNE-EGSQYFIFLLSTRAGGLGLNL 1137

  Fly  1007 VAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1071
            .||:.|||||..|||..|.|:..|.:|.||.....:.||..:.::|:|:......|....::||.
Zfish  1138 QAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1202

  Fly  1072 ----EQQISRHYNQTDLMELYSYELKPSTEREMPILPKDRLFAEILTEHEKLIFKYHEHDSLLEQ 1132
                :|:.|.|..:..|..:..:|.:...|.|   :|.|....:::..:|.....:...|....:
Zfish  1203 AGMFDQKSSSHERRAFLQAILEHEEQNMEEDE---VPDDETLNQMIARNEDEFELFMRMDLDRRR 1264

  Fly  1133 EEHEN------LTEEERKSAW------------AEYEAEK 1154
            |:..|      |.||:...:|            .|.|.||
Zfish  1265 EDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEK 1304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 69/405 (17%)
HepA <382..1071 CDD:440319 187/761 (25%)
DEXHc_ATRX 455..699 CDD:350826 76/254 (30%)
smarca2XP_073805988.1 None

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