DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and kis

DIOPT Version :9

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster


Alignment Length:1659 Identity:354/1659 - (21%)
Similarity:595/1659 - (35%) Gaps:596/1659 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PNARHTDAATPLTT------------DDSNSSSVSR--RESATESKSASESESSPPRSNTKQSRT 56
            |.|...|.....|:            ||...|.:.|  .|...|:::..|:..|.|.|       
  Fly  1380 PKAGSADGEAETTSGGTGVDGESPDYDDIPVSKIPRGSNEDEKEAEAGDETVDSVPDS------- 1437

  Fly    57 HKNVKASGKATVSSSSDSDQAVANS--SANDEEKEPVCKIRIVPLEKLLASPKTKERPSRG---- 115
                 |...|:..|..|..::.|.|  :||.||.....|.|     ..|::...|:|.:||    
  Fly  1438 -----AGDPASTPSRRDRKRSTARSRRNANSEEGGSARKNR-----GSLSAKALKKRRNRGRIVP 1492

  Fly   116 -SQQKNVTINDSSDEEPLKGSKLVLPARKS-----RNKNASIIELSDSEEVDEEEESLLVAIPLP 174
             |..::.|::.:....|...|::....|:|     |.|....:.|..|    ::|.|||||.|:.
  Fly  1493 ESDGEDDTLDRTPPPSPPPDSEMDSNKRRSSRNTQRKKYIDDVMLRFS----DDENSLLVASPVK 1553

  Fly   175 KEAQQTKPEKNSSKASKESIEKRQKAQKEATTSSARAIRSVNGTRRGSLSSERSSRASSSRAESP 239
            |:   .||..|:|.::..|..::.:.|..|...:|:.:    |..:.:|..:.||:..:|.:.|.
  Fly  1554 KD---KKPSANASNSNAGSDVEKTEPQSGAEGDAAQEV----GEEKSNLPLDESSQLEASSSTSA 1611

  Fly   240 PRPKR----------------------------CVVRL-------KR---VSLPKTKPAQKPKKM 266
            ...|.                            .||:|       ||   :..||.| |.:||:.
  Fly  1612 VAEKERQISTDAANAAMSSKPNYVYINTGDEDSMVVQLVLAMRMGKRELILDKPKEK-APEPKQD 1675

  Fly   267 SSDSE-EAATTSKKSRQRRSKSESEADSD-------------YEAPAAEEEEEEERKSSGDE--- 314
            ...|| :.|||.|.....:.|:|.|:..|             .|..:.||.|.::.|.|.::   
  Fly  1676 EEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESSAMEVDSKEESEPDDSKKSDEDNKD 1740

  Fly   315 ------EEAANSSDSEVMPQRKRRRKKSE------------------------------------ 337
                  ::....||.|..|:.:....|:|                                    
  Fly  1741 KDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVLEKMEVDEKA 1805

  Fly   338 -------------SDKGSSDFEPE----EKQK------------KKGRKRIKKTSSGESDGDGDD 373
                         .:|.:.|..||    ||.|            |:|.:.:||.:..:::.|   
  Fly  1806 NDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKENDEKTEAD--- 1867

  Fly   374 DKQKNKRKHI-----RKIIKTKDLDLTTKEAAKEED----DRR-----KRIEDRQKLYNRIFVKS 424
              .:||.:.:     ...:|.::......|...||:    |||     :|.:.:|.....||...
  Fly  1868 --MENKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENI 1930

  Fly   425 ESVEIN-----------------------------------------ELVLDFDEESKKALLQVD 448
            |....|                                         ||..|.|.:..:..|:.:
  Fly  1931 EDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFN 1995

  Fly   449 K---------------GLLKK------------LKPHQVAG---VKFMWDACFETLKESQEKPGS 483
            |               .|.||            |:|:|:.|   :||.|   :.|         .
  Fly  1996 KIPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSW---YNT---------H 2048

  Fly   484 GCILAHCMGLGKTLQVVTLSHTLLVNTRRTGV-DRVLIISPLSTVNNWAREFTSWM--------- 538
            .||||..||||||:|.:|..|::.    ..|: ...|:|:||||:.||.|||..|.         
  Fly  2049 NCILADEMGLGKTIQSLTFVHSVY----EYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2109

  Fly   539 KFANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVCILGYDM----YRILANEKAKGLRKKQREQ 599
            ...::..|:.|:. .||.:..::.|....||   |.|..::|    |..|   ||...|      
  Fly  2110 SVTSKQMIQDYEY-YYKTESGKVLKEPIKFN---VLITTFEMIVTDYMDL---KAFNWR------ 2161

  Fly   600 LMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPN 664
                       |.|.||.|.|||....:.:.:.::..:.|::|:|||||||:.|.:.::.|::|:
  Fly  2162 -----------LCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPS 2215

  Fly   665 LLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEY 729
            ...:.:|:|:.|      |..  .||.::       :.|..||:..:.||....:...|.||.|.
  Fly  2216 QFSSQEEFMSEF------GSL--RTEEEV-------NKLQALLKPMMLRRLKDDVEKSLAPKEET 2265

  Fly   730 VVYTTLSELQQKLY-GYYMTTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVIAKR 793
            ::...|:.:|:|.| |...........|........|.....:||:...||.             
  Fly  2266 IIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPY------------- 2317

  Fly   794 LLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNAGGGDSD 858
            ||:..:..::                    ..|||                   ::|        
  Fly  2318 LLNGAEEQIQ--------------------YDFKS-------------------QHG-------- 2335

  Fly   859 SDLEMLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQS 923
                             :||..::|        |.:..:.|::::.:||.:.:|.|.::|:|||.
  Fly  2336 -----------------EDPESYYK--------NLILSAGKMVLIDKLLPKLKANGHRVLIFSQM 2375

  Fly   924 LQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNL 988
            ::.||::|.:|..     :.|.||                 |:||......|:....:::...:.
  Fly  2376 VRCLDILEDYLVY-----RKYPFE-----------------RIDGRIRGNLRQEAIDRYSKPGSD 2418

  Fly   989 RARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQ 1053
            |. :||:.|:||||||||.||:.|:|:|..|||.:|.|:..|.:|.||.|...||||:...|.|:
  Fly  2419 RF-VFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYER 2482

  Fly  1054 KVYERQVAKQATAKRVI-----------DEQQISRHYNQTDLMELYSYE---------------- 1091
            :::::...|....|.|:           :.:|:|:...: ||::..:|.                
  Fly  2483 EMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIE-DLLKKGAYGAVMDDDNAGDKFCEED 2546

  Fly  1092 ----LKPSTE--------------------------------------REMPILP----KDRLFA 1110
                ||..|:                                      :::.|.|    :|....
  Fly  2547 IDSILKRRTQVITMESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETED 2611

  Fly  1111 EILTE-HEKLIFKYHEHDSLLE--QEEHENLTEEER-----KSAWAEYEAEKTRTVQAS-QYMSY 1166
            .:|:| ..:...|.:.|:.::|  .||..|...:|.     :|...:.:.::.|..:.: :|:..
  Fly  2612 LVLSEPRRRTQIKRYGHEDVMELNSEESSNENSDEEGGIGLRSRRRKEKRDRAREKKGNDEYIPR 2676

  Fly  1167 DRNAFGNQVMG----QFGNASGS----VTSNKI-FGF-RSDILLQLLNMKISKDHQELNQNQVIQ 1221
            :|:|..  .:|    |:||.:.|    |....: ||: |...||:|...|  :..::::.....:
  Fly  2677 ERDALA--ALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGQFK--RGWRDVDVEDCAR 2737

  Fly  1222 LVPTYLQQLYNEMNNGD------------PT-------MYKDLLNLHSNIVHPSGMYMNPLLYAN 1267
            ::..|..|:|    .||            ||       :.:|...|| |:| |.|.         
  Fly  2738 IILLYCLQVY----KGDEKIKTFIWDLITPTEDGEVQKISRDHSGLH-NLV-PRGR--------- 2787

  Fly  1268 QNPNAAGYNQGTGGVPPMAGGSVAHGPPAAPAPG 1301
               |....|:.:.||             :.||||
  Fly  2788 ---NGGKSNKESTGV-------------STPAPG 2805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 DTHCT 258..335 CDD:285332 24/99 (24%)
SNF2_N 458..779 CDD:278600 91/338 (27%)
DEXDc 483..646 CDD:238005 52/176 (30%)
Helicase_C 913..1035 CDD:278689 40/121 (33%)
kisNP_001137761.1 BASP1 1554..1786 CDD:283191 49/239 (21%)
HepA 1676..2527 CDD:223627 223/1019 (22%)
SDA1 <1693..>1854 CDD:283052 25/160 (16%)
CHROMO <1879..1919 CDD:237991 8/39 (21%)
Chromo 1941..1996 CDD:278797 5/54 (9%)
DEXDc 2048..2197 CDD:238005 52/176 (30%)
Helicase_C 2350..2464 CDD:278689 44/136 (32%)
RR_TM4-6 3728..>3877 CDD:283990
BRK 4569..4613 CDD:197800
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467121
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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