DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and HELLS

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_001275996.1 Gene:HELLS / 3070 HGNCID:4861 Length:884 Species:Homo sapiens


Alignment Length:1030 Identity:249/1030 - (24%)
Similarity:386/1030 - (37%) Gaps:346/1030 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 PAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEE--------ERKSSGDEE 315
            ||::|.. |..||..|..            .:.|:....||..||||:        |||..   |
Human     2 PAERPAG-SGGSEAPAMV------------EQLDTAVITPAMLEEEEQLEAAGLERERKML---E 50

  Fly   316 EAANSSDSEVMPQRKRR-RKKSESDKGSSDF-----------EPEEKQKKKGRKRIKKTSSGESD 368
            :|..|.|.|....|.|| :...|.....|.|           |.::|:|.:.:|...|...|::.
Human    51 KARMSWDRESTEIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKESLKVKKGKNS 115

  Fly   369 GDGDDDKQKNKRK--------HIRKIIKTKDLDLTTKEAAKEEDDRRKR-----IEDRQK----- 415
            .|..::|...::|        :|.:::..:::....|:..||.:|....     :||.||     
Human   116 IDASEEKPVMRKKRGREDESYNISEVMSKEEILSVAKKNKKENEDENSSSTNLCVEDLQKNKDSN 180

  Fly   416 --LYNRIFVKSESVEINELVLDFDEESK----KALLQVDK----GLLKKLKPHQVAGVKFMWDAC 470
              :.:|:   ||:|..|.... ||...|    ....|..|    |:::..:...:..::.:|:  
Human   181 SIIKDRL---SETVRQNTKFF-FDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWE-- 239

  Fly   471 FETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFT 535
                      .|...|||..||||||:|.:.   |:.:..:|......|:..||||:.||..||.
Human   240 ----------NGINGILADEMGLGKTVQCIA---TIALMIQRGVPGPFLVCGPLSTLPNWMAEFK 291

  Fly   536 SWMKFANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILAN-EKAKG-------- 591
            .:.                .|.||.::...:           .:..:::.| .|.||        
Human   292 RFT----------------PDIPTMLYHGTQ-----------EERQKLVRNIYKRKGTLQIHPVV 329

  Fly   592 -----LRKKQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNL 651
                 :..:.|..|.....    ..::.||||.:||.|..:.:.:.|.....:::||||||||||
Human   330 ITSFEIAMRDRNALQHCYW----KYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNL 390

  Fly   652 REYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKL---------- 706
            .|.:.::.|:.|::....|.:.:.|  .||:   ...|..|:...:...::||.|          
Human   391 SELWSLLNFLLPDVFDDLKSFESWF--DITS---LSETAEDIIAKEREQNVLHMLHQERIPRMYV 450

  Fly   707 --------LEGCIQRR-------------------DYSVLAPYL------------PPKHEYVVY 732
                    .||.:..|                   ::.:|.|:|            |||.|.|||
Human   451 SEFTDEGFFEGKLPSRKDLYDIRPYENTYLLKLHTNFEILTPFLLRRLKSDVALEVPPKREVVVY 515

  Fly   733 TTLSELQQKLYGYYMTTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSN 797
            ..||:.|:..|                                            ..|..|.::|
Human   516 APLSKKQEIFY--------------------------------------------TAIVNRTIAN 536

  Fly   798 DDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNAGG-GDSDSDL 861
                |.|....||.|                       .:.:|:.|:|..::.|... .|..::|
Human   537 ----MFGSSEKETIE-----------------------LSPTGRPKRRTRKSINYSKIDDFPNEL 574

  Fly   862 EMLGGLGGGSSVQKDDPSEWWKPFVE-----ERELN----------------------------- 892
            |.|     .|.:|.:...|  :..||     |.|:|                             
Human   575 EKL-----ISQIQPEVDRE--RAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIEYPIDPVTQ 632

  Fly   893 -------NVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDV 950
                   .|.:|.|.|||.|:|.:.:..|.|:|:|||....||::..:..|.|.|          
Human   633 EFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFN---------- 687

  Fly   951 GDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIF 1015
                        :.|||||.|..:||.....||  |:....:||:|||||||||||.||:.|:|:
Human   688 ------------FSRLDGSMSYSEREKNMHSFN--TDPEVFIFLVSTRAGGLGINLTAADTVIIY 738

  Fly  1016 DVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQ------- 1073
            |..|||..|.|:..|.:|.||.||..:|||:...|::||:.||..||:...|.:|.:.       
Human   739 DSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQS 803

  Fly  1074 --QISRHY-NQTDLMEL-----YSYELKPSTEREMPILPKDRLFAEILTEHEKLI 1120
              .:|::: :..:||||     |..|:|.|  ||..|..||   .|:|.:...||
Human   804 GLNLSKNFLDPKELMELLKSRDYEREIKGS--REKVISDKD---LELLLDRSDLI 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 57/248 (23%)
HepA <382..1071 CDD:440319 193/813 (24%)
DEXHc_ATRX 455..699 CDD:350826 59/257 (23%)
HELLSNP_001275996.1 DEXHc_HELLS_SMARCA6 220..499 CDD:350767 69/329 (21%)
PLN03142 221..>869 CDD:215601 193/791 (24%)

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