Protein Alignment XNP and Rad54l

DIOPT Version :10

• Sequence 1: NP_651398.1
• Gene: XNP / 43080
• FlyBaseID: FBgn0039338
• Length: 1311
• Species: Drosophila melanogaster
• Sequence 2: NP_001128432.1
• Gene: Rad54l / 298429
• RGDID: 1310600
• Length: 748
• Species: Rattus norvegicus
• Alignment Length: 878
• Identity: 233/878 - (26%)
• Similarity: 379/878 - (43%)
• Gaps: 217/878 - (24%)

  Fly   327 PQRKRRRKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSGESDGDGDDDKQKNKRKHIRKII-KTK 390
            |.:..|||..:......|::||....|| ||...:|.:.:.       .....||.:.::: :..
  Rat     7 PSQLARRKPEDISSDDEDWQPETVTPKK-RKSTAETQAQQC-------FLSPFRKPLTQLLNRPP 63

  Fly   391 DLDLTTKEAAKEEDDRR--------------------KRIEDRQKLYNRIFVKSESVEINELV-- 433
            .||.:..||.......:                    ||...|:.|:       :.:|...||
  Rat    64 CLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALH-------DPLEEGALVLY 121

  Fly   434 ----------LDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGS-GCIL 487
                      |..|:|.....:.||..|.|.|:|||..||||:|:..     .|:..||| |||:
  Rat   122 EPPPLSVHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECV-----TSRRIPGSHGCIM 181

  Fly   488 AHCMGLGKTLQVVTLSHTLLVNTR--RTGVDRVLIISPLSTVNNWAREFTSWMKFANRNDIEVYD 550
            |..||||||||.:||..|||..:.  :..:::.:::||.|.|.||..|...|:  ..|......|
  Rat   182 ADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWL--GGRIQPLAID 244

  Fly   551 ISRYKDKPTRIFKLNEWFNEGG------VCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGP 609
             ...||:..|  ||..:.|:.|      :.|:.|:.:|:......||                ..
  Rat   245 -GGSKDEIDR--KLEGFMNQRGARVPSPILIISYETFRLHVEVLKKG----------------NV 290

  Fly   610 DLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMN 674
            .||:|||||.|||.:....:|:..:.|.||::::|||:||:|.||:.::.||...:|||..|:..
  Rat   291 GLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKK 355

  Fly   675 RFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQ 739
            .|..||...:...::|.|.:|.:.|...|..::..|:.||...:|:.|||.|.|.||...|:.||
  Rat   356 HFELPILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ 420

  Fly   740 QKLYGYYMTTHREQSGGDVVGKG---ARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSD 801
            .:||..::   |:....:.:.:|   .........|:::..||.        :|..:.::.:|
  Rat   421 TELYKRFL---RQAKPEEELHEGKMSVSSLSSITSLKKLCNHPA--------LIYDKCVAEED-- 472

  Fly   802 MEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNAG----GGDSDSDLE 862
              ||                                           .|..|    |.:|.:...
  Rat   473 --GF-------------------------------------------EGTLGIFPPGYNSKAVEP 492

  Fly   863 MLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEA-IGDKLLVFSQSLQS 926
            .|.|                                |:|:|..:|....: ..||:::.|...|:
  Rat   493 QLSG--------------------------------KMLVLDYILAMTRSRSSDKVVLVSNYTQT 525

  Fly   927 LDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRAR 991
            ||:.|                      |.|......|.||||:.|:::|..:.::||:.:: ...
  Rat   526 LDLFE----------------------KLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSS-PDF 567

  Fly   992 LFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVY 1056
            :|::|::|||.|:||:.|||:|:||..|||::|.|::.||:|.||.|.||||||::.||:|:|::
  Rat   568 VFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIF 632

  Fly  1057 ERQVAKQATAKRVIDEQQ-ISRHYNQTDLMELYSYELKPSTEREMPILPKDRLFAEILTEHEKLI 1120
            :||..|:|.:..|:||:| :.||::..:|.||::.:....::..      |||.......:.::.
  Rat   633 QRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTH------DRLHCRRCVNNRQVW 691

  Fly  1121 FKYHEHD--SLLEQEEH----ENLTEEERKSAW 1147
            ......|  |.|.|..|    ..|.:|..::||
  Rat   692 PPPDGSDCTSDLAQWNHNTDKRGLQDEVLQAAW 724

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
XNP	NP_651398.1	PTZ00121	<173..>460	CDD:173412	35/165 (21%)
		HepA	<382..1071	CDD:440319	199/738 (27%)
		DEXHc_ATRX	455..699	CDD:350826	86/252 (34%)
Rad54l	NP_001128432.1	HepA	<90..647	CDD:440319	195/702 (28%)
		DEXHc_RAD54A	153..395	CDD:350825	89/267 (33%)