DRSC/TRiP Functional Genomics Resources

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Protein Alignment XNP and Ercc6l

DIOPT Version :10

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_666347.2 Gene:Ercc6l / 236930 MGIID:2654144 Length:1240 Species:Mus musculus


Alignment Length:1020 Identity:245/1020 - (24%)
Similarity:407/1020 - (39%) Gaps:325/1020 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 KEAAKEEDDRRKRIEDRQKLYN---RIF----VKSESVEINELVLDF-DEESKKALLQV-DKGLL 452
            |||||..|     :|:..||:|   .||    |.|...::.|.:... :||.....:.| ..|||
Mouse    29 KEAAKNGD-----LEESLKLFNLAKDIFPTKKVMSRIQKLQEALEQLAEEEDDDEFIDVCSSGLL 88

  Fly   453 ------KKLKPHQVAGVKFMWDACFETLKESQEKPG-SGCILAHCMGLGKTLQVVT----LSHTL 506
                  :||..||..|:.|::         |..|.| .|.|||..||||||:|::.    :....
Mouse    89 LYRELYEKLFEHQKEGIAFLY---------SLYKDGRKGGILADDMGLGKTVQIIAFLSGMFDAS 144

  Fly   507 LVNTRRTGVDRVLIISPLSTVNNWAREFTSW---MKFANRNDIEVYDISRYKDKPTRIFKLNEWF 568
            |||       .||:|.|.:.:|.|..||..|   |:      ::.:..|...::...:.::.:  
Mouse   145 LVN-------HVLLIMPTNLINTWVNEFAKWTPGMR------VKTFHGSSKSERTRSLTRIQQ-- 194

  Fly   569 NEGGVCILGYDMYRILANEKAKGLRKKQREQLM----QALVDPGPDLVVCDEGHLLKNEKTSISK 629
             ..||.|..|.|  :|.|          .:||.    ||.|   .|.|:.||.|.:|:..|..:.
Mouse   195 -RNGVVITTYQM--LLNN----------WQQLASFNGQAFV---WDYVILDEAHKIKSASTKSAV 243

  Fly   630 AVTRMRTKRRIVLTGTPLQNNLREYYCMIQFV-KPNLLGTYKEYMNRFVNPITNGQYTDST--ER 691
            ....:....|::|||||:||||:|.:.:..|. :.:||||.|.:...:.:||...:..|:|  |:
Mouse   244 CARAIPASNRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEK 308

  Fly   692 DLRLMKHRSHILHKLLEGCIQRRDYSVLAPY---------------------------------- 722
            .|.|         |:.|..::     ::.||                                  
Mouse   309 ALGL---------KISENLME-----IIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDM 359

  Fly   723 --LPPKHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVN 785
              |..|::.:|:..|..||:::|..:::....:   :::.:......:...|:::..||..|...
Mouse   360 FSLARKNDLIVWIRLLPLQEEIYRKFVSLDHIK---ELLMETRSPLAELGVLKKLCDHPRLLSAR 421

  Fly   786 SDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNG 850
                 |.|||:...:.   |...:.:|.|..||                                
Mouse   422 -----ACRLLNLGTAT---FSAQDENEQEDVSN-------------------------------- 446

  Fly   851 NAGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSP---------KLLILLRL 906
                                                    :|::.|.|         |::.|:.|
Mouse   447 ----------------------------------------MNSIDHLPDKTLIQESGKMIFLMSL 471

  Fly   907 LQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCS 971
            |::.:..|.:.||||||::.|::||..|       ||..|:               ..|:||:.:
Mouse   472 LERLQDEGHQTLVFSQSIKILNIIERLL-------KNKHFK---------------TLRIDGTVT 514

  Fly   972 -VEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFG 1035
             :.:||...:.|..  |....:||::|:.||:|:.|.||.||||||.||||:.|.|::.||||.|
Mouse   515 HLWEREKRIQLFQQ--NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIG 577

  Fly  1036 QIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQIS-RHYNQTDLMELYSY-EL-KPSTE 1097
            |.:...:||||..||:|:|:|.|||.|.:..::...|::.. |::.:.:|.||::. :| |.:|:
Mouse   578 QKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFTKQELKELFTVGDLQKSATQ 642

  Fly  1098 REMPIL-PKDRLFAEILTEHEKLIFKYH--------EHDSL----LEQEEHENLTEEERKSAWAE 1149
            .::..| ...|...|.|.||   |...|        :||.:    |..:|..::.|:      ::
Mouse   643 MQLQCLHAAQRRSDEKLDEH---IAYLHLLGIAGISDHDLMFTRDLSVKEELDMLED------SQ 698

  Fly  1150 YEAEKTRTVQASQYM--SYDRNAFGNQVMGQFGNASGSVTSNKIFGFRSDILLQLLNMKISKDHQ 1212
            |..::   ||.:|::  |..:|....|..|.      ..|..|...|.|         :..|...
Mouse   699 YIHQR---VQKAQFLVESESQNTVQRQTTGI------EETWLKAQEFPS---------QQKKKGT 745

  Fly  1213 ELN--QNQVIQLV--PTYLQQLYNEMNN---------GDPTMYKDLLNL-------HSNIVHPSG 1257
            |.|  |.|..:|:  ||.::.:.::|.:         .:|..:.::.::       |.|....:|
Mouse   746 EFNKPQPQPSRLLTKPTQVEAISSQMASITICDQSAESEPQEHSEVHDVTSLQGSHHFNSTSDAG 810

  Fly  1258 MYMNPLLYANQNPNAAGYNQGTGGVPPMAGGSVAHGPPAAPAPGF 1302
                         ..|...||...:     |.|:.....:||.||
Mouse   811 -------------TIASLPQGAESI-----GEVSTDSLLSPAKGF 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 PTZ00121 <173..>460 CDD:173412 24/77 (31%)
HepA <382..1071 CDD:440319 190/749 (25%)
DEXHc_ATRX 455..699 CDD:350826 76/258 (29%)
Ercc6lNP_666347.2 TPR 1 21..54 12/29 (41%)
HepA <96..613 CDD:440319 169/677 (25%)
DEXHc_ERCC6L 97..329 CDD:350759 80/285 (28%)
DEAH box 229..232 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 736..760 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 778..813 4/47 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 845..879
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 974..1085
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1104..1185
TPR 2 1191..1224
Blue background indicates that the domain is not in the aligned region.

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