DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment XNP and RAD54L2

DIOPT Version :9

Sequence 1:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_001309182.1 Gene:RAD54L2 / 23132 HGNCID:29123 Length:1467 Species:Homo sapiens


Alignment Length:1236 Identity:378/1236 - (30%)
Similarity:578/1236 - (46%) Gaps:265/1236 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 IELSDSEEVDEEEESLLVAIPLPKEAQQTKPEKNSSKASKESI----------EKRQKAQKEATT 206
            :||.|:||.:||||   ||:   :|..:...|......|.|.:          :.:|..:..:||
Human    17 VELEDAEEEEEEEE---VAV---EECDRDDEEDLLDDPSLEGMCGTEHAQLGEDGQQPPRCTSTT 75

  Fly   207 SS----ARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCVVRLKRVSL--PKTKPAQKPKK 265
            ||    :..:|...|.   :|:||...:   .||:.|...:|.:.:|.|...  |.||.||:   
Human    76 SSQSEPSEQLRRHQGK---NLASEDPKK---KRAQKPSHMRRNIRKLLREDQLEPVTKAAQQ--- 131

  Fly   266 MSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEEERKSSGDEEEAANSSDSEVMPQRK 330
                 ||.....:..:||:         ||.||......|     ...||.|..:||...:|.|.
Human   132 -----EELERRKRLEQQRK---------DYAAPIPTVPLE-----FLPEEIALRASDGPQLPPRV 177

  Fly   331 RRRKK--SESDKGSSDFEPEEKQKKKGRKRIKKTSSGESDG----------DGDDDKQKNKRKHI 383
            ..::.  .:|..||.|       :|..|..:.:.||||.|.          ..||::::....|:
Human   178 LAQEVICLDSSSGSED-------EKSSRDEVIELSSGEEDTLHIVDSSESVSEDDEEEEKGGTHV 235

  Fly   384 RKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEINELVLDFDEESKKALLQVD 448
            ..::..:|                        ...|:.|.          |:...|.:...|...
Human   236 NDVLNQRD------------------------ALGRVLVN----------LNHPPEEENVFLAPQ 266

  Fly   449 KGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRT 513
              |.:.:||||:.|::|::|...|:|:..:...|.||||||.|||||||||::....|.   |.|
Human   267 --LARAVKPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHSMGLGKTLQVISFIDVLF---RHT 326

  Fly   514 GVDRVLIISPLSTVNNWAREFTSWM--------------------KFANRNDIEVYDISRYKDKP 558
            ....||.|.|::|:.||..||..|:                    |....||       .:|...
Human   327 PAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPADNKPEEVQPRFFKVHILND-------EHKTMA 384

  Fly   559 TRIFKLNEWFNEGGVCILGYDMYRILANEK--AKGLRKKQ--------------------REQLM 601
            :|...:.:|.:||||.::||:|||:|..:|  |.|..||.                    |.:..
Human   385 SRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRPKKTKKRSHPVIIDLDEEDRQQEFRREFE 449

  Fly   602 QALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLL 666
            :||..||||:|:|||||.:||.:.|.|:|:..:|::||:||||.||||||.||:||:.||:|:.|
Human   450 KALCRPGPDVVICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFL 514

  Fly   667 GTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVV 731
            ||.:|:.|.|..||.|||..|||.:|:|||::|||:||.||||.:|||.::||..:||.|.|.|:
Human   515 GTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVI 579

  Fly   732 YTTLSELQQKLYGYYMTTHREQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLS 796
            ...||::|:.||..:|...|:......:|...  .:.|....:||.||..|.    ..:.|..|:
Human   580 LVRLSKIQRDLYTQFMDRFRDCGSSGWLGLNP--LKAFCVCCKIWNHPDVLY----EALQKESLA 638

  Fly   797 ND-DSDMEGFICDETDEDEAASNSSDSC--ETFKSDASMSGLAASSGKVKKRKTRNGNAGGGDSD 858
            |: |.|:         |:..::.:|..|  :..|.....|.||:|.|:....|            
Human   639 NEQDLDV---------EELGSAGTSARCPPQGTKGKGEDSTLASSMGEATNSK------------ 682

  Fly   859 SDLEMLGGLGGGSSVQKDD---PSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIGDKLLVF 920
                .|.|:|.....::.:   ..||.|..:...:...:.:|||:::|..|:::...:|||:|||
Human   683 ----FLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVF 743

  Fly   921 SQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNI 985
            ||||.:|.:||.||...:....    .|..|.....|.....|||||||....:||.:..|||:.
Human   744 SQSLSTLALIEEFLGKREVPCP----PGTEGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDP 804

  Fly   986 TNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGT 1050
            :||...|||:|||||.||:||:.|||||:||.||||.||.|::.||||:||.||||||||:|..|
Human   805 SNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYT 869

  Fly  1051 MEQKVYERQVAKQATAKRVIDEQQISRHYNQTDLMELYSY-ELKPSTEREMPILP-KDRLFAEIL 1113
            :|:|:|:||::||..:.||:|:.....::.:.::..|..: |.:|:.:..:.:.. |:.:.....
Human   870 LEKKIYDRQISKQGMSDRVVDDLNPMLNFTRKEVENLLHFVEKEPAPQVSLNVKGIKESVLQLAC 934

  Fly  1114 TEHEKLIFKY-HEHDSLLEQEEHENLTEEERKSAWAEYEAEK------TRTVQASQYMSYDRN-- 1169
            .::..||.|. .||:|||...:...||:.|:|:|...||.:|      ||...|..|.:.|::  
Human   935 LKYPHLITKEPFEHESLLLNRKDHKLTKAEKKAAKKSYEEDKRTSVPYTRPSYAQYYPASDQSLT 999

  Fly  1170 ---AFGNQ-------------------------VMGQFGNASGSVTS----NKIFGF------RS 1196
               ||..:                         :|.:.....|||:|    |....|      |:
Human  1000 SIPAFSQRNWQPTLKGDEKPVASVRPVQSTPIPMMPRHVPLGGSVSSASSTNPSMNFPINYLQRA 1064

  Fly  1197 DILLQ---------LLNMKISKDHQ-ELNQNQVIQLV----PTYLQ----QLYNEMNNGDPTMYK 1243
            .:|:|         :..:..|.|.| .:|..:.|.::    .||::    :::.....|.|.:.:
Human  1065 GVLVQKVVTTTDIVIPGLNSSTDVQARINAGESIHIIRGTKGTYIRTSDGRIFAVRATGKPKVPE 1129

  Fly  1244 D 1244
            |
Human  1130 D 1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
XNPNP_651398.1 DTHCT 258..335 CDD:285332 19/76 (25%)
SNF2_N 458..779 CDD:278600 143/362 (40%)
DEXDc 483..646 CDD:238005 74/204 (36%)
Helicase_C 913..1035 CDD:278689 62/121 (51%)
RAD54L2NP_001309182.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..150 42/161 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..234 13/54 (24%)
SNF2_N 274..628 CDD:278600 145/365 (40%)
DEXDc 300..492 CDD:238005 72/201 (36%)
DEAH box 463..466 2/2 (100%)
LXXLL motif 1 551..555 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 649..673 5/23 (22%)
Helicase_C 720..854 CDD:278689 67/137 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1120..1171 3/11 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1184..1221
DEPP <1192..1278 CDD:291988
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1247..1284
LXXLL motif 2 1329..1333
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1445..1467
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D111318at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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