DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED28 and MED28

DIOPT Version :10

Sequence 1:NP_651397.1 Gene:MED28 / 43079 FlyBaseID:FBgn0039337 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_079481.2 Gene:MED28 / 80306 HGNCID:24628 Length:178 Species:Homo sapiens


Alignment Length:139 Identity:55/139 - (39%)
Similarity:82/139 - (58%) Gaps:7/139 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LMDEFEEAFQSCLLTLTKQEPNSGTNKEEIDLEVQKTTNRFIDVARQMEAFFLQKRFLVSTLKPY 75
            |:||.|.:|::|..:|..|:..:||::|||...|.:...:|:|:|||.|.||||||..:|..||.
Human    44 LVDELESSFEACFASLVSQDYVNGTDQEEIRTGVDQCIQKFLDIARQTECFFLQKRLQLSVQKPE 108

  Fly    76 MLIKDENQDLSIEIQRKEALLQKHYNRLEEWKACLSDIQQGVHSRPTP-PIGS-GMLQGPGGGMP 138
            .:||::..:|..|:|||:||:|||..:|..|:..|.||.. .|.:|.. |.|| ..|:.....:|
Human   109 QVIKEDVSELRNELQRKDALVQKHLTKLRHWQQVLEDINV-QHKKPADIPQGSLAYLEQASANIP 172

  Fly   139 PMGGTPPRP 147
                .|.:|
Human   173 ----APLKP 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED28NP_651397.1 Med28 10..110 CDD:463302 43/98 (44%)
MED28NP_079481.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44 55/139 (40%)
Med28 43..143 CDD:463302 43/98 (44%)

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