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Protein Alignment MED28 and med28
DIOPT Version :9
Sequence 1: | NP_651397.1 |
Gene: | MED28 / 43079 |
FlyBaseID: | FBgn0039337 |
Length: | 189 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001007771.1 |
Gene: | med28 / 493610 |
ZFINID: | ZDB-GENE-041121-4 |
Length: | 179 |
Species: | Danio rerio |
Alignment Length: | 148 |
Identity: | 56/148 - (37%) |
Similarity: | 81/148 - (54%) |
Gaps: | 7/148 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 NESGGGNLMDEFEEAFQSCLLTLTKQEPNSGTNKEEIDLEVQKTTNRFIDVARQMEAFFLQKRFL 68
|......|:||.|.:|::|..:|..|:..:||::|||...|.:...:|:|||||.|.||||||..
Zfish 38 NRGANNTLVDELEASFEACFASLVSQDYVNGTDQEEIRTGVDQCIQKFLDVARQTECFFLQKRLQ 102
Fly 69 VSTLKPYMLIKDENQDLSIEIQRKEALLQKHYNRLEEWKACLSDIQQGVHSRPTPPIGSGMLQGP 133
:|..||..:.|::..:|..|:||||.|:|||..::..|:..|.||.. .|.:||. :.|||
Zfish 103 LSVQKPEQVEKEDASELKNELQRKEMLIQKHLAKIHHWQQVLEDINV-QHKKPTE-----LPQGP 161
Fly 134 GGGMPPMGGTPPRPGMMP 151
...:.......|.| |.|
Zfish 162 LAFLEQASANLPAP-MKP 178
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170592706 |
Domainoid |
1 |
1.000 |
59 |
1.000 |
Domainoid score |
I10718 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_2CMY4 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H11873 |
Inparanoid |
1 |
1.050 |
100 |
1.000 |
Inparanoid score |
I4998 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1504193at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0006497 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto38770 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_107353 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR13512 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4649 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X5477 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
15 | 14.790 |
|
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