Protein Alignment MED28 and Med28

DIOPT Version :9

• Sequence 1: NP_651397.1
• Gene: MED28 / 43079
• FlyBaseID: FBgn0039337
• Length: 189
• Species: Drosophila melanogaster
• Sequence 2: NP_001100687.1
• Gene: Med28 / 305391
• RGDID: 1305875
• Length: 178
• Species: Rattus norvegicus
• Alignment Length: 118
• Identity: 51/118 - (43%)
• Similarity: 75/118 - (63%)
• Gaps: 2/118 - (1%)

  Fly    11 LMDEFEEAFQSCLLTLTKQEPNSGTNKEEIDLEVQKTTNRFIDVARQMEAFFLQKRFLVSTLKPY 75
            |:||.|.:|::|..:|..|:..:||::|||...|.:...:|:|:|||.|.||||||..:|..||.
  Rat    44 LVDELESSFEACFASLVSQDYVNGTDQEEIRTGVDQCIQKFLDIARQTECFFLQKRLQLSVQKPD 108

  Fly    76 MLIKDENQDLSIEIQRKEALLQKHYNRLEEWKACLSDIQQGVHSRPTP-PIGS 127
            .:||::..:|..|:|||:||:|||..:|..|:..|.||.. .|.:|.. |.||
  Rat   109 QVIKEDVSELRSELQRKDALVQKHLTKLRHWQQVLEDINV-QHKKPADMPQGS 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MED28	NP_651397.1	Med28	39..130	CDD:288448	40/90 (44%)
Med28	NP_001100687.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..43
		Med28	43..143	CDD:402955	43/98 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166350994
Domainoid	1	1.000	61	1.000	Domainoid score	I10258
eggNOG	1	0.900	-	-		E1_2CMY4
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H11873
Inparanoid	1	1.050	99	1.000	Inparanoid score	I4918
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1504193at2759
OrthoFinder	1	1.000	-	-		FOG0006497
OrthoInspector	1	1.000	-	-		oto96562
orthoMCL	1	0.900	-	-		OOG6_107353
Panther	1	1.100	-	-	LDO	PTHR13512
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X5477
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.760