DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED28 and med28

DIOPT Version :10

Sequence 1:NP_651397.1 Gene:MED28 / 43079 FlyBaseID:FBgn0039337 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001096476.1 Gene:med28 / 100125095 XenbaseID:XB-GENE-961728 Length:169 Species:Xenopus tropicalis


Alignment Length:150 Identity:60/150 - (40%)
Similarity:86/150 - (57%) Gaps:9/150 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASNESGGGNLMDEFEEAFQSCLLTLTKQEPNSGTNKEEIDLEVQKTTNRFIDVARQMEAFFLQKR 66
            |.|.|  ..|:|:.|.:|::|..:|..|:..:||::|||...|::...:|:|||||.|.||||||
 Frog    28 AKNPS--STLVDDLESSFEACFASLVSQDYVNGTDQEEIRTGVEQCIQKFLDVARQTECFFLQKR 90

  Fly    67 FLVSTLKPYMLIKDENQDLSIEIQRKEALLQKHYNRLEEWKACLSDIQQGVHSRPTPPIGSGMLQ 131
            ..:|..||..:||::..:|..|:||||||:|||..:|..|:..|.:| .|.|.:.     |.|.|
 Frog    91 LQLSVQKPEQVIKEDVSELRNELQRKEALIQKHLTKLRSWQQVLEEI-NGQHKKT-----SEMPQ 149

  Fly   132 GPGGGMPPMGGTPPRPGMMP 151
            ||...:.......|.| |.|
 Frog   150 GPLAYLEQASANIPAP-MKP 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED28NP_651397.1 Med28 10..110 CDD:463302 44/99 (44%)
med28NP_001096476.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35 3/8 (38%)
Med28 34..134 CDD:463302 44/99 (44%)

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