DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment alrm and RLP37

DIOPT Version :9

Sequence 1:	NP_651393.1	Gene:	alrm / 43074	FlyBaseID:	FBgn0039332	Length:	471	Species:	Drosophila melanogaster
Sequence 2:	NP_188952.1	Gene:	RLP37 / 821886	AraportID:	AT3G23110	Length:	835	Species:	Arabidopsis thaliana

Alignment Length:	423	Identity:	99/423 - (23%)
Similarity:	174/423 - (41%)	Gaps:	92/423 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 SYHLATPSSGSGQLRRLWLQ--DHCS-AGICTNVVIGRSDYVILSQAP-IGGTTMLTFLNSSIAK 79
            |:|:.|.|         |.:  |.|| .|:..:..:|  :.:.|:... |..|::.:  :||:.|
plant    59 SHHVTTLS---------WNKTVDCCSWEGVTCDATLG--EVISLNLVSYIANTSLKS--SSSLFK 110

  Fly    80 IPHLLFDTFPDLQVLRMENCSLETFEKPQFEGASNLMSLFLGYNRL-KDIPKNIFLGADNLATLH 143
            :.|        |:.|.:.:|:|:..........|:|..|.|.:|:| .:.|.:|    .||..|.
plant   111 LRH--------LRHLELSHCNLQGEIPSSIGNLSHLTYLDLSFNQLVGEFPVSI----GNLNQLE 163

  Fly   144 LQGNQLKQLGNH---SFHALKEVKELSLAENQLEQISLGVFSGMRKLMDLNLAGNRLDALPRGVF 205
            .....:..||.:   ||..|.::.||.|.:||.....: |.|.:..|..::|:.|..::......
plant   164 YIDLWVNALGGNIPTSFANLTKLSELHLRQNQFTGGDI-VLSNLTSLSIVDLSSNYFNSTISADL 227

  Fly   206 DRNLNLTKLNLARNRFTA-FESELLKLQPVFTQLDISGNIFQ---------------ELTLNFTM 254
            .:..||.:..::.|.|.. |.|.||.: |....:.:|.|.|:               ||.:::..
plant   228 SQLHNLERFWVSENSFFGPFPSFLLMI-PSLVDICLSENQFEGPINFGNTTSSSKLTELDVSYNN 291

  Fly   255 LDVAIAHSCDLRRLTVYGVIHELDL-HNNSLREMP---------------------HIPLA---- 293
            ||..|..|..    |:..:.| |:| |||...::|                     .:|.:
plant   292 LDGLIPKSIS----TLVSLEH-LELSHNNFRGQVPSSISKLVNLDGLYLSHNNFGGQVPSSIFKL 351

  Fly   294 ANVSSLDLSHNPLGNLQGNPLRRFTSLLRLNLSATGAH-ELPEGLFKKQSHLQMLDISGNSIYSL 357
            .|:..||||||..|....:.:.:..:|..|:||..... .:|:.:: :.|.|..:|:|.||..|.
plant   352 VNLEHLDLSHNDFGGRVPSSISKLVNLSSLDLSYNKFEGHVPQCIW-RSSKLDSVDLSYNSFNSF 415

  Fly   358 KITIFDSLKALQYFYFQQNN--------WNCDF 382
            ...:....::|:..:...:|        |.|:|
plant   416 GRILELGDESLERDWDLSSNSLQGPIPQWICNF 448

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
alrm	NP_651393.1	LRR_RI	84..354	CDD:238064	75/316 (24%)
		LRR_8	91..149	CDD:290566	15/58 (26%)
		leucine-rich repeat	91..114	CDD:275380	4/22 (18%)
		leucine-rich repeat	115..138	CDD:275380	7/23 (30%)
		LRR_8	138..197	CDD:290566	18/61 (30%)
		leucine-rich repeat	139..162	CDD:275380	7/25 (28%)
		leucine-rich repeat	163..186	CDD:275380	7/22 (32%)
		LRR_8	185..243	CDD:290566	13/58 (22%)
		leucine-rich repeat	187..210	CDD:275380	3/22 (14%)
		leucine-rich repeat	211..283	CDD:275380	23/88 (26%)
		leucine-rich repeat	284..319	CDD:275380	10/59 (17%)
		LRR_8	318..377	CDD:290566	13/59 (22%)
		leucine-rich repeat	320..343	CDD:275380	5/23 (22%)
		leucine-rich repeat	344..365	CDD:275380	6/20 (30%)
RLP37	NP_188952.1	LRRNT_2	39..82	CDD:311940	9/31 (29%)
		PLN00113	66..>764	CDD:331614	96/416 (23%)
		leucine-rich repeat	114..137	CDD:275380	4/22 (18%)
		leucine-rich repeat	138..161	CDD:275380	9/26 (35%)
		leucine-rich repeat	162..185	CDD:275380	6/22 (27%)
		leucine-rich repeat	186..208	CDD:275380	7/22 (32%)
		leucine-rich repeat	209..281	CDD:275380	15/72 (21%)
		leucine-rich repeat	257..278	CDD:275380	3/20 (15%)
		leucine-rich repeat	282..305	CDD:275380	7/26 (27%)
		leucine-rich repeat	306..329	CDD:275380	7/23 (30%)
		leucine-rich repeat	330..353	CDD:275380	1/22 (5%)
		leucine-rich repeat	354..375	CDD:275380	7/20 (35%)
		leucine-rich repeat	402..420	CDD:275380	6/17 (35%)
		leucine-rich repeat	421..450	CDD:275380	5/28 (18%)
		leucine-rich repeat	451..474	CDD:275380
		leucine-rich repeat	475..498	CDD:275380
		leucine-rich repeat	499..520	CDD:275380
		leucine-rich repeat	523..546	CDD:275380
		leucine-rich repeat	547..572	CDD:275380
		leucine-rich repeat	573..597	CDD:275380
		leucine-rich repeat	598..649	CDD:275380
		leucine-rich repeat	651..673	CDD:275380
		leucine-rich repeat	674..697	CDD:275380
		leucine-rich repeat	698..721	CDD:275380
		leucine-rich repeat	722..755	CDD:275380
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000