Sequence 1: | NP_651393.1 | Gene: | alrm / 43074 | FlyBaseID: | FBgn0039332 | Length: | 471 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001094861.1 | Gene: | LINGO3 / 645191 | HGNCID: | 21206 | Length: | 592 | Species: | Homo sapiens |
Alignment Length: | 420 | Identity: | 97/420 - (23%) |
---|---|---|---|
Similarity: | 159/420 - (37%) | Gaps: | 78/420 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 WLLSLQVVLILPPSYHLATPSSGSGQLRRLWLQDHCSAGICTNVV-------------------- 50
Fly 51 --IGRSDYVILSQAPIGGTTMLTFLNSSIAKIPHL---LFDTFPDLQVLRMENCSLETFEKPQFE 110
Fly 111 GASNLMSLFLGYNRLKDIPKNIFLGADNLATLHLQGNQLKQLGNHSFHALKEVKELSLAENQLEQ 175
Fly 176 ISLGVFSGMRKLMDLNLAGNRLDALPRGVFDRNLNLTKLNLARNRFTAFESELLKLQPVFTQLDI 240
Fly 241 SGNIFQELTLNFTMLDVAIAHSCDLRRLTVYGVIHELDLHNNSLREMPHIPL--AANVSSLDLSH 303
Fly 304 NPLGNLQGNPLRRFTSLLRLNLSATGAHELPEGLFKKQSHLQMLDISGNSIYSLKITIFDSLKAL 368
Fly 369 QYFYFQQNNWNCDFLQLLMSSFVKRKDISF 398 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
alrm | NP_651393.1 | LRR_RI | 84..354 | CDD:238064 | 66/271 (24%) |
LRR_8 | 91..149 | CDD:290566 | 16/57 (28%) | ||
leucine-rich repeat | 91..114 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 115..138 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 138..197 | CDD:290566 | 18/58 (31%) | ||
leucine-rich repeat | 139..162 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 163..186 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 185..243 | CDD:290566 | 13/57 (23%) | ||
leucine-rich repeat | 187..210 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 211..283 | CDD:275380 | 15/71 (21%) | ||
leucine-rich repeat | 284..319 | CDD:275380 | 10/36 (28%) | ||
LRR_8 | 318..377 | CDD:290566 | 11/58 (19%) | ||
leucine-rich repeat | 320..343 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 344..365 | CDD:275380 | 5/20 (25%) | ||
LINGO3 | NP_001094861.1 | LRRNT | 24..58 | CDD:214470 | 4/40 (10%) |
LRR 1 | 55..76 | 2/20 (10%) | |||
LRR_8 | 57..138 | CDD:290566 | 25/104 (24%) | ||
LRR_4 | 59..95 | CDD:289563 | 7/35 (20%) | ||
leucine-rich repeat | 59..79 | CDD:275380 | 2/19 (11%) | ||
LRR 2 | 79..100 | 6/20 (30%) | |||
leucine-rich repeat | 80..103 | CDD:275380 | 6/22 (27%) | ||
LRR 3 | 103..124 | 10/44 (23%) | |||
leucine-rich repeat | 104..127 | CDD:275380 | 10/46 (22%) | ||
LRR_RI | 111..>286 | CDD:238064 | 52/213 (24%) | ||
LRR_8 | 127..>172 | CDD:290566 | 14/44 (32%) | ||
LRR 4 | 127..148 | 8/20 (40%) | |||
leucine-rich repeat | 128..151 | CDD:275380 | 8/22 (36%) | ||
LRR 5 | 151..172 | 5/20 (25%) | |||
leucine-rich repeat | 152..199 | CDD:275380 | 12/46 (26%) | ||
LRR 6 | 175..196 | 6/20 (30%) | |||
LRR_8 | 198..258 | CDD:290566 | 15/74 (20%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 4/22 (18%) | ||
LRR 7 | 207..228 | 2/20 (10%) | |||
leucine-rich repeat | 224..247 | CDD:275380 | 6/31 (19%) | ||
LRR_8 | 247..303 | CDD:290566 | 17/61 (28%) | ||
LRR 8 | 247..268 | 6/26 (23%) | |||
leucine-rich repeat | 248..271 | CDD:275380 | 6/28 (21%) | ||
LRR 9 | 271..292 | 6/20 (30%) | |||
leucine-rich repeat | 272..293 | CDD:275380 | 7/20 (35%) | ||
LRR 10 | 295..316 | 4/20 (20%) | |||
leucine-rich repeat | 296..319 | CDD:275380 | 4/22 (18%) | ||
LRR 11 | 319..340 | 5/20 (25%) | |||
leucine-rich repeat | 322..343 | CDD:275380 | 6/20 (30%) | ||
I-set | 407..497 | CDD:254352 | |||
Ig | 422..490 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |