Protein Alignment alrm and Lingo4

DIOPT Version :9

• Sequence 1: NP_651393.1
• Gene: alrm / 43074
• FlyBaseID: FBgn0039332
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_001102659.1
• Gene: Lingo4 / 499668
• RGDID: 1562025
• Length: 618
• Species: Rattus norvegicus
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alrm	NP_651393.1	LRR_RI	84..354	CDD:238064
		LRR_8	91..149	CDD:290566
		leucine-rich repeat	91..114	CDD:275380
		leucine-rich repeat	115..138	CDD:275380
		LRR_8	138..197	CDD:290566
		leucine-rich repeat	139..162	CDD:275380
		leucine-rich repeat	163..186	CDD:275380
		LRR_8	185..243	CDD:290566
		leucine-rich repeat	187..210	CDD:275380
		leucine-rich repeat	211..283	CDD:275380
		leucine-rich repeat	284..319	CDD:275380
		LRR_8	318..377	CDD:290566
		leucine-rich repeat	320..343	CDD:275380
		leucine-rich repeat	344..365	CDD:275380
Lingo4	NP_001102659.1	leucine-rich repeat	87..110	CDD:275380
		LRR_8	88..145	CDD:290566
		LRR_4	88..126	CDD:289563
		LRR_RI	110..345	CDD:238064
		leucine-rich repeat	111..134	CDD:275380
		LRR_8	134..193	CDD:290566
		leucine-rich repeat	135..158	CDD:275380
		leucine-rich repeat	159..182	CDD:275380
		LRR_8	182..237	CDD:290566
		leucine-rich repeat	183..206	CDD:275380
		leucine-rich repeat	207..230	CDD:275380
		leucine-rich repeat	231..254	CDD:275380
		leucine-rich repeat	255..302	CDD:275380
		LRR_8	278..334	CDD:290566
		leucine-rich repeat	303..326	CDD:275380
		LRR_8	326..385	CDD:290566
		leucine-rich repeat	327..348	CDD:275380
		leucine-rich repeat	351..374	CDD:275380
		IG_like	445..526	CDD:214653
		Ig	456..526	CDD:299845

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000