Protein Alignment alrm and CG5810

DIOPT Version :10

• Sequence 1: NP_651393.1
• Gene: alrm / 43074
• FlyBaseID: FBgn0039332
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_650952.2
• Gene: CG5810 / 42513
• FlyBaseID: FBgn0038866
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 387
• Identity: 102/387 - (26%)
• Similarity: 170/387 - (43%)
• Gaps: 54/387 - (13%)

  Fly    41 CSAGICTNVVIGRSDYVILSQAPI----GGTTMLTFLNSSIAKIPHLLFDTFPDLQVLRMENCSL 101
            |....|||:....:..|......:    .....|...:|.:|.:|..:|...|.|....:..|.|
  Fly    35 CRENTCTNLKYPSASAVAYFSENVTKHLRKYETLVLHSSDLANLPRKIFLNLPQLVEFHVLECEL 99

  Fly   102 ETFEKPQFEGASNLMSLFLGYNRLKDIPKNIFLGADNLATLHLQGNQLKQLGNHSFHALKEVKEL 166
            :..|...|:||.||..|..|.|.|:.:..|.|..|..|..|:|..|||:.|....|..||.::::
  Fly   100 QQIESVCFDGAKNLKRLNFGGNALRVLDSNTFELATQLEELNLSDNQLEDLPTTIFRPLKNLQKI 164

  Fly   167 SLAENQLEQISLGVFSGMRKLMDLNLAGNRLDALPRGVF-DRNLNLTKLNLARNRFTAFESELLK 230
            :|:.|:|..:|..:||.:..|..:|:..|:|..||..:| |:..:|::       |:|..::|::
  Fly   165 NLSNNRLITLSQHIFSQLGSLKSINVDSNQLVELPGELFRDQRKHLSE-------FSAQSNQLVR 222

  Fly   231 LQPVFTQLDISGNIFQELTLNFTMLDVAIAHSCDLRRLTVYGVIHELDLHNNSLREMPHIPLAAN 295
                     |..|||:|:.      .::::.:..||||.:...|:||:..|..|..   :.|...
  Fly   223 ---------IPFNIFREID------HLSLSFNPQLRRLHLSAKINELEATNCDLES---VELDGR 269

  Fly   296 VSSLDLSHNPLGNLQGNPLRRFTSLLRLNLSATGAHELPEGLFKKQSHLQMLDISGNSIYSL--- 357
            |..:.|..||  .|....:.:...|..|.|:.|..:.|  ....|.|.|..||::  .|.:|
  Fly   270 VIGVQLEANP--KLHELKISQPQDLEHLYLANTNLYRL--DFLSKASKLVDLDVT--DIVNLADL 328

  Fly   358 -KITIFDSLKALQYFYFQQNNWNCDFLQLLMSSFVKRKDISFME-------DITAPELVDDY 411
             |||....|:.|.:.|....:.:.|.|..|       ||::::|       :|...:|.:|:
  Fly   329 PKITSAKGLERLSFTYDNLTSNHMDMLPHL-------KDLNYLEISHEKGKEIFIKDLDEDF 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alrm	NP_651393.1	leucine-rich repeat	91..114	CDD:275380	7/22 (32%)
		LRR	<100..426	CDD:443914	89/324 (27%)
		leucine-rich repeat	115..138	CDD:275380	8/22 (36%)
		leucine-rich repeat	139..162	CDD:275380	9/22 (41%)
		leucine-rich repeat	163..186	CDD:275380	6/22 (27%)
		leucine-rich repeat	187..210	CDD:275380	8/23 (35%)
		leucine-rich repeat	211..283	CDD:275380	17/71 (24%)
		leucine-rich repeat	284..319	CDD:275380	7/34 (21%)
		leucine-rich repeat	320..343	CDD:275380	6/22 (27%)
		leucine-rich repeat	344..365	CDD:275380	8/24 (33%)
CG5810	NP_650952.2	LRR	<61..353	CDD:443914	88/322 (27%)
		leucine-rich repeat	65..88	CDD:275380	5/22 (23%)
		leucine-rich repeat	89..112	CDD:275380	7/22 (32%)
		leucine-rich repeat	113..136	CDD:275380	8/22 (36%)
		leucine-rich repeat	137..160	CDD:275380	9/22 (41%)
		leucine-rich repeat	161..184	CDD:275380	6/22 (27%)
		leucine-rich repeat	185..209	CDD:275380	8/23 (35%)
		leucine-rich repeat	210..231	CDD:275380	8/36 (22%)