Sequence 1: | NP_651393.1 | Gene: | alrm / 43074 | FlyBaseID: | FBgn0039332 | Length: | 471 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_659551.1 | Gene: | Lrrc15 / 246296 | RGDID: | 70551 | Length: | 578 | Species: | Rattus norvegicus |
Alignment Length: | 411 | Identity: | 100/411 - (24%) |
---|---|---|---|
Similarity: | 160/411 - (38%) | Gaps: | 69/411 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 WWLLSLQVVLILPPSYHLATPSSGSGQLRRLWLQDHCSAGICTNVVIGRSDYVILSQAP-----I 64
Fly 65 GGTTMLTFLNSSIAKIPHLLFDTFPDLQVLRMENCSLETFEKPQFEGASNLMSLFLGYNRLKDIP 129
Fly 130 KNIFLGADNLATLHLQGNQLKQLGNHSFHALKEVKELSLAENQLEQISLGVFSGMRKLMDLNLAG 194
Fly 195 NRLDALPRGVFDRNLNLTKLNLARNRFTAFESELLKLQPVFTQLDISGNIFQELTLNFTMLDVAI 259
Fly 260 AHSCDLRRLTVYGV---IHELDLHNN---------------------SLREMPHIPLAA-----N 295
Fly 296 VSSLDLSHNPLGNLQGNPLRRFTSLLRLNLSATGAHELPEGLFKKQSHLQMLDISGNSIYSLKIT 360
Fly 361 IFDSLKALQYFYFQQNNWNCD 381 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
alrm | NP_651393.1 | LRR_RI | 84..354 | CDD:238064 | 76/298 (26%) |
LRR_8 | 91..149 | CDD:290566 | 20/57 (35%) | ||
leucine-rich repeat | 91..114 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 115..138 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 138..197 | CDD:290566 | 19/58 (33%) | ||
leucine-rich repeat | 139..162 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 163..186 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 185..243 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 187..210 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 211..283 | CDD:275380 | 17/95 (18%) | ||
leucine-rich repeat | 284..319 | CDD:275380 | 10/39 (26%) | ||
LRR_8 | 318..377 | CDD:290566 | 13/58 (22%) | ||
leucine-rich repeat | 320..343 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 344..365 | CDD:275380 | 6/20 (30%) | ||
Lrrc15 | NP_659551.1 | LRR_8 | 54..113 | CDD:290566 | 12/75 (16%) |
LRR 1 | 54..75 | 7/37 (19%) | |||
LRR 2 | 78..99 | 1/20 (5%) | |||
leucine-rich repeat | 79..102 | CDD:275380 | 1/22 (5%) | ||
LRR_RI | <94..303 | CDD:238064 | 61/226 (27%) | ||
LRR_8 | 102..161 | CDD:290566 | 16/58 (28%) | ||
LRR 3 | 102..123 | 4/20 (20%) | |||
leucine-rich repeat | 103..126 | CDD:275380 | 4/22 (18%) | ||
LRR 4 | 126..147 | 6/20 (30%) | |||
leucine-rich repeat | 127..150 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 149..209 | CDD:290566 | 21/59 (36%) | ||
LRR 5 | 150..171 | 9/20 (45%) | |||
leucine-rich repeat | 151..174 | CDD:275380 | 8/22 (36%) | ||
LRR 6 | 174..195 | 6/20 (30%) | |||
leucine-rich repeat | 175..198 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 198..257 | CDD:290566 | 21/58 (36%) | ||
LRR 7 | 198..219 | 8/20 (40%) | |||
leucine-rich repeat | 199..222 | CDD:275380 | 8/22 (36%) | ||
LRR 8 | 222..243 | 7/20 (35%) | |||
leucine-rich repeat | 223..246 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 245..305 | CDD:290566 | 18/77 (23%) | ||
LRR 9 | 246..267 | 5/20 (25%) | |||
leucine-rich repeat | 247..270 | CDD:275380 | 4/22 (18%) | ||
LRR 10 | 270..291 | 6/38 (16%) | |||
leucine-rich repeat | 271..294 | CDD:275380 | 7/40 (18%) | ||
LRR_8 | 293..353 | CDD:290566 | 12/59 (20%) | ||
LRR 11 | 294..315 | 5/20 (25%) | |||
leucine-rich repeat | 295..318 | CDD:275380 | 5/22 (23%) | ||
LRR_4 | 318..358 | CDD:289563 | 9/39 (23%) | ||
LRR 12 | 318..339 | 3/20 (15%) | |||
leucine-rich repeat | 319..342 | CDD:275380 | 3/22 (14%) | ||
LRR 13 | 342..363 | 7/20 (35%) | |||
leucine-rich repeat | 343..364 | CDD:275380 | 7/20 (35%) | ||
LRR_8 | 366..424 | CDD:290566 | 13/57 (23%) | ||
LRR 14 | 366..387 | 5/20 (25%) | |||
leucine-rich repeat | 367..387 | CDD:275380 | 5/19 (26%) | ||
LRR 15 | 390..411 | 5/20 (25%) | |||
leucine-rich repeat | 391..412 | CDD:275380 | 6/20 (30%) | ||
TPKR_C2 | 423..>462 | CDD:301599 | 4/6 (67%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 476..500 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45617 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |