DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-49L and ndufs2

DIOPT Version :9

Sequence 1:NP_651392.2 Gene:ND-49L / 43073 FlyBaseID:FBgn0039331 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_989363.1 Gene:ndufs2 / 394993 XenbaseID:XB-GENE-975277 Length:459 Species:Xenopus tropicalis


Alignment Length:437 Identity:268/437 - (61%)
Similarity:338/437 - (77%) Gaps:6/437 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EPYDTHYWYPDPEFMNKQQYIVWYPE--GDEWKKRP-NFKGKQIPPVDRTFRTKLINFGPAHPAA 151
            :|.....|.||.|:..:....|.||.  .::|...| |.|.   |||::|.....|||||.||||
 Frog    26 QPVRGKQWQPDVEWTEQYAGAVMYPSPITEKWVPAPWNDKD---PPVEKTVSNLTINFGPQHPAA 87

  Fly   152 HGVLRMILELDNETVLNADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSCMANELAYCLAVE 216
            |||||:::||..|:|...||||||||||||||||||||.|||||||||||||.|.||.||.||||
 Frog    88 HGVLRLVMELSGESVKRCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVE 152

  Fly   217 KLLNVEVPRRAKYIRTMFSEIMRLTNHTMAIGSSVLDCGAITPLFWLFEEREKLYEFSERASGAR 281
            ||||::.|.||::||.:|.||.|:.||.||:....||.||:||.||:||||||::||.||.||||
 Frog   153 KLLNIQPPPRAQWIRVLFGEITRILNHIMAVTCHALDIGAMTPFFWMFEEREKMFEFYERVSGAR 217

  Fly   282 LHAAYIRPGGVASDIPLGFLHDLYQFINQFNERLDEVEDVVTDNRIWRMRNIGIGVISAHDALNY 346
            :||||:|||||..|:|||.:.|:|:||..|:.|:||||:::|:||||:.|.:.|||:||.|||||
 Frog   218 MHAAYVRPGGVHQDMPLGLMDDIYEFIKNFSIRVDEVEEMLTNNRIWKNRTVDIGVVSAEDALNY 282

  Fly   347 GCTGPVLRATGVKWDLRKQQPYDAYDEMDFDVVVGSNGDCYDRYLVRMREMRESVNIIKQCIDAM 411
            |.:|.:||.:|::|||||.||||.||:::|||.:||.||||||||.|:.|||:|:.||.||::.|
 Frog   283 GFSGVMLRGSGIQWDLRKSQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEEMRQSMRIILQCLNKM 347

  Fly   412 PPGEIKVDDLKICPPQRSKMKEGMEDLIHHFKHFSQGFRVPPGQTYCAVESPKGEFGAFLISDGS 476
            |.|||||||.|:.||:||:||..||.||||||.:::|::||||.||.|:|:||||||.:|:||||
 Frog   348 PEGEIKVDDAKVSPPKRSEMKRSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGS 412

  Fly   477 SRPYRCKIRPASYAHLALMAKMAPAHLLADVVAIIGSLDIVFGEIDR 523
            ||||||||:...:||||.:.||:..|:|||||||||:.||||||:||
 Frog   413 SRPYRCKIKAPGFAHLAGLDKMSQGHMLADVVAIIGTQDIVFGEVDR 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-49LNP_651392.2 PRK06075 142..523 CDD:180385 250/380 (66%)
NuoD 142..523 CDD:223722 250/380 (66%)
ndufs2NP_989363.1 PRK06075 70..459 CDD:180385 251/388 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60638
OrthoDB 1 1.010 - - D212488at33208
OrthoFinder 1 1.000 - - FOG0003234
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11993
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2189
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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