DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-49L and Ndufs2

DIOPT Version :10

Sequence 1:NP_651392.2 Gene:ND-49L / 43073 FlyBaseID:FBgn0039331 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001011907.1 Gene:Ndufs2 / 289218 RGDID:1307109 Length:463 Species:Rattus norvegicus


Alignment Length:434 Identity:268/434 - (61%)
Similarity:333/434 - (76%) Gaps:14/434 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 WYPDPEFMNKQQYIVWYP--EGDEWKKRP-----NFKGKQIPPVDRTFRTKLINFGPAHPAAHGV 154
            |.||.|:..:....|.||  |...||..|     ..|.|.:..|       .:||||.|||||||
  Rat    37 WQPDIEWAEQFSGAVMYPSKETAHWKPPPWNDVDVLKEKVVTNV-------TLNFGPQHPAAHGV 94

  Fly   155 LRMILELDNETVLNADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSCMANELAYCLAVEKLL 219
            ||::|||..|.|...||||||||||||||||||||.|||||||||||||.|.||.||.|||||||
  Rat    95 LRLVLELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLL 159

  Fly   220 NVEVPRRAKYIRTMFSEIMRLTNHTMAIGSSVLDCGAITPLFWLFEEREKLYEFSERASGARLHA 284
            |::.|.||::||.:|.||.|:.||.||:.:..||.||:||.||:||||||::||.||.||||:||
  Rat   160 NIQPPPRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSGARMHA 224

  Fly   285 AYIRPGGVASDIPLGFLHDLYQFINQFNERLDEVEDVVTDNRIWRMRNIGIGVISAHDALNYGCT 349
            ||||||||..|:|||.:.|:|:|...|:.|:||||:::|:|||||.|.:.|||:||.||||||.:
  Rat   225 AYIRPGGVHQDLPLGLMDDIYEFSKNFSLRIDEVEEMLTNNRIWRNRTVDIGVVSAEDALNYGFS 289

  Fly   350 GPVLRATGVKWDLRKQQPYDAYDEMDFDVVVGSNGDCYDRYLVRMREMRESVNIIKQCIDAMPPG 414
            |.:||.:|::|||||.||||.||:::|||.:||.||||||||.|:.|||:|:.||:||::.||||
  Rat   290 GVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEEMRQSLRIIEQCLNKMPPG 354

  Fly   415 EIKVDDLKICPPQRSKMKEGMEDLIHHFKHFSQGFRVPPGQTYCAVESPKGEFGAFLISDGSSRP 479
            ||||||.|:.||:|::||..||.||||||.:::|::||||.||.|:|:||||||.:|:|||||||
  Rat   355 EIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRP 419

  Fly   480 YRCKIRPASYAHLALMAKMAPAHLLADVVAIIGSLDIVFGEIDR 523
            |||||:...:||||.:.||:..|:|||||||||:.|||||||||
  Rat   420 YRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEIDR 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-49LNP_651392.2 PRK06075 142..523 CDD:180385 252/380 (66%)
Ndufs2NP_001011907.1 PRK06075 77..463 CDD:180385 253/392 (65%)

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