DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-49L and nduf-2.2

DIOPT Version :9

Sequence 1:NP_651392.2 Gene:ND-49L / 43073 FlyBaseID:FBgn0039331 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_498423.1 Gene:nduf-2.2 / 188912 WormBaseID:WBGene00006463 Length:474 Species:Caenorhabditis elegans


Alignment Length:463 Identity:249/463 - (53%)
Similarity:340/463 - (73%) Gaps:31/463 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PPYEPYDTH-YWYPDPEFMNKQQY-------IVWYPEG----------DEWKK--------RPNF 125
            |.....|:| .||||.:|  ::|:       .:|..|.          |:.:|        ..|:
 Worm    17 PAISNRDSHTIWYPDAKF--ERQFKTGGTLGKLWMSERVSDFDDQIGLDKLEKLAYSDPVLSDNY 79

  Fly   126 KGKQIPPVDRTFRTKLINFGPAHPAAHGVLRMILELDNETVLNADPHIGLLHRGTEKLIEYKTYT 190
            :||:   .::.....::||||.|||||||||::|:|:.|.::.|.||||||||.||||||:||||
 Worm    80 EGKK---REKNLENMILNFGPQHPAAHGVLRLVLKLEGEVIIKAIPHIGLLHRATEKLIEHKTYT 141

  Fly   191 QALPYFDRLDYVSCMANELAYCLAVEKLLNVEVPRRAKYIRTMFSEIMRLTNHTMAIGSSVLDCG 255
            |||||||||||||.|.||.|:.||:||||.::||.||||||.:|.|:.|:.||.|.|.:..||.|
 Worm   142 QALPYFDRLDYVSMMCNEQAFSLAIEKLLGIDVPPRAKYIRILFGELTRIQNHIMGITTHALDVG 206

  Fly   256 AITPLFWLFEEREKLYEFSERASGARLHAAYIRPGGVASDIPLGFLHDLYQFINQFNERLDEVED 320
            |:||.||:|||||||:|||||.||||:||.|:||||||.|:|:|.:.|:|.:..:|..|:||:||
 Worm   207 AMTPFFWMFEEREKLFEFSERVSGARMHANYVRPGGVAWDLPVGLMDDIYDWAVKFPARIDELED 271

  Fly   321 VVTDNRIWRMRNIGIGVISAHDALNYGCTGPVLRATGVKWDLRKQQPYDAYDEMDFDVVVGSNGD 385
            ::|:||||:.|.:.||::||.||||:|.:|.::|.:|:|.|:||.:|||||.:|:|||.:|:.||
 Worm   272 MLTENRIWKARTVDIGLVSASDALNWGFSGVMVRGSGIKQDVRKTEPYDAYADMEFDVPIGTKGD 336

  Fly   386 CYDRYLVRMREMRESVNIIKQCIDAMPPGEIKVDDLKICPPQRSKMKEGMEDLIHHFKHFSQGFR 450
            ||||||.|:.|||:|:||:.||::.||.||||.||.|:.||:|::|||.||.||||||.|::||:
 Worm   337 CYDRYLCRVEEMRQSLNIVHQCLNKMPTGEIKSDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQ 401

  Fly   451 VPPGQTYCAVESPKGEFGAFLISDGSSRPYRCKIRPASYAHLALMAKMAPAHLLADVVAIIGSLD 515
            ||||.||..:|:||||||.:|::||:.:||||.||...:||||.:..:....|:||:||:||::|
 Worm   402 VPPGATYVPIEAPKGEFGVYLVADGTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVIGTMD 466

  Fly   516 IVFGEIDR 523
            |||||:||
 Worm   467 IVFGEVDR 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-49LNP_651392.2 PRK06075 142..523 CDD:180385 231/380 (61%)
NuoD 142..523 CDD:223722 231/380 (61%)
nduf-2.2NP_498423.1 PRK06075 85..474 CDD:180385 231/388 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159968
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0649
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1889
OMA 1 1.010 - - QHG60638
OrthoDB 1 1.010 - - D212488at33208
OrthoFinder 1 1.000 - - FOG0003234
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101051
Panther 1 1.100 - - O PTHR11993
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2189
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.670

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