DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND-49L and gas-1

DIOPT Version :9

Sequence 1:NP_651392.2 Gene:ND-49L / 43073 FlyBaseID:FBgn0039331 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_510569.1 Gene:gas-1 / 181646 WormBaseID:WBGene00001520 Length:482 Species:Caenorhabditis elegans


Alignment Length:463 Identity:252/463 - (54%)
Similarity:342/463 - (73%) Gaps:31/463 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PPYEPYDTH-YWYPDPEFMNKQQY-------IVWYPEG----------DEWKK--------RPNF 125
            |..:..::| .||||.:|  ::|:       .:|..|.          |:.:|        ..|:
 Worm    25 PATQTRNSHTIWYPDAKF--ERQFKTGGTLGKLWMSERVSDFDEKIGLDKLEKLAYSDPVMSDNY 87

  Fly   126 KGKQIPPVDRTFRTKLINFGPAHPAAHGVLRMILELDNETVLNADPHIGLLHRGTEKLIEYKTYT 190
            .|||   .::.....::||||.|||||||||::|:|:.|.::.|.||||||||.||||||:||||
 Worm    88 SGKQ---REKNLENMILNFGPQHPAAHGVLRLVLKLEGEVIIKAIPHIGLLHRATEKLIEHKTYT 149

  Fly   191 QALPYFDRLDYVSCMANELAYCLAVEKLLNVEVPRRAKYIRTMFSEIMRLTNHTMAIGSSVLDCG 255
            |||||||||||||.|.||.|:.|||||||.:::|.|||||||:..|:.|:.||.|.|.:..||.|
 Worm   150 QALPYFDRLDYVSMMCNEQAWSLAVEKLLGIDIPTRAKYIRTLMGELTRIQNHIMGITTHALDVG 214

  Fly   256 AITPLFWLFEEREKLYEFSERASGARLHAAYIRPGGVASDIPLGFLHDLYQFINQFNERLDEVED 320
            |:||.||:|||||||:|||||.||||:||.|:||||||.|:|:|.:.|:|.:..:|.||:||:||
 Worm   215 AMTPFFWMFEEREKLFEFSERVSGARMHANYVRPGGVAWDLPIGLMDDIYDWAIKFPERIDELED 279

  Fly   321 VVTDNRIWRMRNIGIGVISAHDALNYGCTGPVLRATGVKWDLRKQQPYDAYDEMDFDVVVGSNGD 385
            ::|:||||:.|.|.||::||.||||:|.:|.::|.:|:|.|:||.:|||||.:|:|||.:|:.||
 Worm   280 MLTENRIWKARTIDIGLVSAADALNWGFSGVMVRGSGIKQDVRKTEPYDAYADMEFDVPIGTKGD 344

  Fly   386 CYDRYLVRMREMRESVNIIKQCIDAMPPGEIKVDDLKICPPQRSKMKEGMEDLIHHFKHFSQGFR 450
            ||||||.|:.|||:|:||:.||::.||.|||||||.|:.||:|::|||.||.||||||.|::||:
 Worm   345 CYDRYLCRIEEMRQSLNIVHQCLNKMPAGEIKVDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQ 409

  Fly   451 VPPGQTYCAVESPKGEFGAFLISDGSSRPYRCKIRPASYAHLALMAKMAPAHLLADVVAIIGSLD 515
            ||||.||..:|:||||||.:|::||:.:||||.||...:||||.:..:....|:||:||:||::|
 Worm   410 VPPGATYVPIEAPKGEFGVYLVADGTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVIGTMD 474

  Fly   516 IVFGEIDR 523
            |||||:||
 Worm   475 IVFGEVDR 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-49LNP_651392.2 PRK06075 142..523 CDD:180385 234/380 (62%)
NuoD 142..523 CDD:223722 234/380 (62%)
gas-1NP_510569.1 NuoD 90..482 CDD:223722 236/394 (60%)
PRK06075 93..482 CDD:180385 234/388 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159967
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0649
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1889
OMA 1 1.010 - - QHG60638
OrthoDB 1 1.010 - - D212488at33208
OrthoFinder 1 1.000 - - FOG0003234
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101051
Panther 1 1.100 - - O PTHR11993
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2189
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.670

Return to query results.
Submit another query.