DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tobi and Gaa

DIOPT Version :10

Sequence 1:NP_651391.1 Gene:tobi / 43072 FlyBaseID:FBgn0261575 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_954549.1 Gene:Gaa / 367562 RGDID:735227 Length:953 Species:Rattus norvegicus


Alignment Length:646 Identity:145/646 - (22%)
Similarity:230/646 - (35%) Gaps:150/646 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 TLVKSGVVAGTGSEITHVKVSRDQVLQGTQPRDCVPLKTGSTHWFSGPEQKQHYWPVERQRHSNY 155
            |.:.|..:||.|..::.:.:|.:........||..| ..|...:.|.|                 
  Rat   250 TSLPSQHIAGLGEHLSPLMLSTEWTRITLWNRDVAP-SQGVNLYGSHP----------------- 296

  Fly   156 SYLPKELDNFGVGERYWLNGDGVFLYVESNTPLFIDQNSAAYPDQLCLSAISALPYDPRVTSAKF 220
            .||  .|::.|:..       ||||.           ||.|.  .:.|....||.:  |.|....
  Rat   297 FYL--ALEDGGLAH-------GVFLL-----------NSNAM--DVVLQPSPALTW--RSTGGIL 337

  Fly   221 VYHVAVAKDAKAAHRYAVKTFLGQPTGYPDERMVMHPVWS------TWALYKAEVSDDVVRDFAK 279
            ..:|.:..:.|:    .|:.:| ...|||    .|.|.|.      .|......:...||.:..:
  Rat   338 DVYVFLGPEPKS----VVQQYL-DVVGYP----FMPPYWGLGFHLCRWGYSSTAIVRQVVENMTR 393

  Fly   280 Q--ILDNGFNNSQLEIDDDWEDCYGAMTFRKNKFPDSKTLTDDLKALGFRVTLWIHPFINNNCTA 342
            .  .||..:|      |.|:.|.....||.::.|.|...:..:|...|.|..:.:.|.|:::..|
  Rat   394 THFPLDVQWN------DLDYMDARRDFTFNQDGFADFPDMVHELHQGGRRYMMIVDPAISSSGPA 452

  Fly   343 ----IYDEAKSKGYLVLDHEGSS--DTQWWNSKPKDAAILDFTKTEVQEWFSKRLKRLQDEDGID 401
                .|||...:|..:.:..|..  ...|    |...|..|||..|..:|:...:.....:...|
  Rat   453 GSYRPYDEGLRRGVFITNETGQPLIGKVW----PGSTAFPDFTNPETLDWWQDMVSEFHAQVPFD 513

  Fly   402 SFKFDAGETS-------------------WLPS--DPVLQASSSMVTPLQAVGDYVRTVAAFG-- 443
            ....|..|.|                   ::|.  ...|||::...:..|.:..:......:|  
  Rat   514 GMWIDMNEPSNFIRGSQQGCPDNELENPPYVPGVVGGALQAATICASSHQFLSTHYNLHNLYGLT 578

  Fly   444 -DMVEVRSAQNTQDQPIFVRIVDKDS---------EW------GWNNGLLTLISSMLQMNLNGYP 492
             .:...|:...|:....||  :.:.:         .|      .|.: |...:..:||.||.|.|
  Rat   579 EAIASSRALVKTRGTRPFV--ISRSTFAGHGRYAGHWTGDVWSSWEH-LAYSVPEILQFNLLGVP 640

  Fly   493 FVLPDMIGGNGYYEKPPTKELFLRWLQANVFMPALQ-------FSFVPWNFDDEA-IAISKNFTA 549
            .|..|:.|    ::...|:||.:||.|...|.|.::       ....|:.|.:.| .|:.|.||.
  Rat   641 LVGADICG----FQGNTTEELCVRWTQLGAFYPFMRNHNDLNSLPQEPYRFSETAQQAMRKAFTL 701

  Fly   550 LHATYTPYIMKLFKRAVDSGEPVNVPLWWIAPTDEVAQSIYDEFLLGEDIIAAPVVVEGATKRDI 614
            .:| ..||:..||..|...|:.|..||:...|.|....|:..:.|.|..::..||:..|.|....
  Rat   702 RYA-LLPYLYTLFHGAHVKGDTVARPLFLEFPEDPSTWSVDRQLLWGPALLITPVLEPGKTDVTG 765

  Fly   615 YLPEGEWQD---------GNSDQ----------VYTGPTWVMDYAAPLDTLPYFLRVGFTL 656
            |.|:|.|.:         |:...          |::...| :...|||||:...||.|:.:
  Rat   766 YFPKGMWYNLQMVPVETLGSLPSSSPASSFRSIVHSKGQW-LTLEAPLDTINVHLRAGYII 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tobiNP_651391.1 GH31_NET37 255..621 CDD:269878 98/426 (23%)
GaaNP_954549.1 PD 81..132 CDD:197472
NtCtMGAM_N 147..254 CDD:465286 1/3 (33%)
GH31_N 246..359 CDD:270212 32/155 (21%)
GH31_MGAM_SI_GAA 359..717 CDD:269888 84/379 (22%)
Blue background indicates that the domain is not in the aligned region.

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