DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tobi and Gaa

DIOPT Version :9

Sequence 1:NP_651391.1 Gene:tobi / 43072 FlyBaseID:FBgn0261575 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001152796.1 Gene:Gaa / 14387 MGIID:95609 Length:953 Species:Mus musculus


Alignment Length:645 Identity:146/645 - (22%)
Similarity:230/645 - (35%) Gaps:148/645 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 TLVKSGVVAGTGSEITHVKVSRDQVLQGTQPRDCVPLKTGSTHWFSGPEQKQHYWPVERQRHSNY 155
            |.:.|..:.|.|..::.:.:|.|........|| .|...|:..:.|.|                 
Mouse   250 TSLPSQHITGLGEHLSPLMLSTDWARITLWNRD-TPPSQGTNLYGSHP----------------- 296

  Fly   156 SYLPKELDNFGVGERYWLNGDGVFLYVESNTPLFIDQNSAAYPDQLCLSAISALPYDPRVTSAKF 220
            .||  .|::.|:..       ||||.           ||.|.  .:.|....||.:  |.|....
Mouse   297 FYL--ALEDGGLAH-------GVFLL-----------NSNAM--DVILQPSPALTW--RSTGGIL 337

  Fly   221 VYHVAVAKDAKAAHRYAVKTFLGQPTGYPDERMVMHPVWS------TWALYKAEVSDDVVRDFAK 279
            ..:|.:..:.|:    .|:.:| ...|||    .|.|.|.      .|......:...||.:..:
Mouse   338 DVYVFLGPEPKS----VVQQYL-DVVGYP----FMPPYWGLGFHLCRWGYSSTAIVRQVVENMTR 393

  Fly   280 Q--ILDNGFNNSQLEIDDDWEDCYGAMTFRKNKFPDSKTLTDDLKALGFRVTLWIHPFINNNCTA 342
            .  .||..:|      |.|:.|.....||.::.|.|...:..:|...|.|..:.:.|.|::...|
Mouse   394 THFPLDVQWN------DLDYMDARRDFTFNQDSFADFPDMVRELHQDGRRYMMIVDPAISSAGPA 452

  Fly   343 ----IYDEAKSKGYLVLDHEGSS--DTQWWNSKPKDAAILDFTKTEVQEWFSKRLKRLQDEDGID 401
                .|||...:|..:.:..|..  ...|    |...|..|||..|..:|:...:.....:...|
Mouse   453 GSYRPYDEGLRRGVFITNETGQPLIGKVW----PGTTAFPDFTNPETLDWWQDMVSEFHAQVPFD 513

  Fly   402 SFKFDAGETS-------------------WLPS--DPVLQASSSMVTPLQAVGDYVRTVAAFG-- 443
            ....|..|.|                   ::|.  ..:|||::...:..|.:..:......:|  
Mouse   514 GMWLDMNEPSNFVRGSQQGCPNNELENPPYVPGVVGGILQAATICASSHQFLSTHYNLHNLYGLT 578

  Fly   444 -DMVEVRSAQNTQDQPIFVRIVDKDS---------EW------GWNNGLLTLISSMLQMNLNGYP 492
             .:...|:...|:....||  :.:.:         .|      .|.: |...:..:||.||.|.|
Mouse   579 EAIASSRALVKTRGTRPFV--ISRSTFSGHGRYAGHWTGDVRSSWEH-LAYSVPDILQFNLLGVP 640

  Fly   493 FVLPDMIGGNGYYEKPPTKELFLRWLQANVFMPALQ----FSFV---PWNFDDEAIAISKNFTAL 550
            .|..|:.|..|    ..::||.:||.|...|.|.::    .:.|   |:.|.:.|....:...||
Mouse   641 LVGADICGFIG----DTSEELCVRWTQLGAFYPFMRNHNDLNSVPQEPYRFSETAQQAMRKAFAL 701

  Fly   551 HATYTPYIMKLFKRAVDSGEPVNVPLWWIAPTDEVAQSIYDEFLLGEDIIAAPVVVEGATKRDIY 615
            .....||:..||.||...|:.|..||:...|.|....|:..:.|.|..::..||:..|.|:...|
Mouse   702 RYALLPYLYTLFHRAHVRGDTVARPLFLEFPEDPSTWSVDRQLLWGPALLITPVLEPGKTEVTGY 766

  Fly   616 LPEGEW---QDGNSDQVYTGPT----------------WVMDYAAPLDTLPYFLRVGFTL 656
            .|:|.|   |..:.|.:.|.|:                | :...|||||:...||.|:.:
Mouse   767 FPKGTWYNMQMVSVDSLGTLPSPSSASSFRSAVQSKGQW-LTLEAPLDTINVHLREGYII 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tobiNP_651391.1 Glyco_hydro_31 246..653 CDD:279404 113/485 (23%)
GH31_NET37 255..621 CDD:269878 97/425 (23%)
GaaNP_001152796.1 Trefoil 82..130 CDD:278515
NtCtMGAM_N 147..253 CDD:293468 1/2 (50%)
GH31_N 246..359 CDD:270212 32/155 (21%)
Glyco_hydro_31 340..825 CDD:279404 118/511 (23%)
GH31_MGAM_SI_GAA 359..717 CDD:269888 83/378 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838260
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1501
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.