DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tobi and ganc

DIOPT Version :9

Sequence 1:NP_651391.1 Gene:tobi / 43072 FlyBaseID:FBgn0261575 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_021323148.1 Gene:ganc / 100536353 ZFINID:ZDB-GENE-130530-754 Length:916 Species:Danio rerio


Alignment Length:730 Identity:160/730 - (21%)
Similarity:263/730 - (36%) Gaps:163/730 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLASFCLWEAVHTCASIEQRYKFPNSNVYVRLRRGDKLQYELMKGEKSLQTVTFDNFDSSANLVE 73
            |||.|..::...:||..|          .|.|..|:||.:|      :||.....:..:|:...|
Zfish   129 LLAFFSPFKLEISCAGEE----------IVTLNPGNKLCFE------TLQDPASRSSSNSSEGDE 177

  Fly    74 TSSGSYQLTDGQSTVEFTLVKSGVVAGTGSEIT-HVKVSRDQVLQGTQPRDCVPLKTGSTHWFSG 137
            ...|.::.|..|    |..:|:...:..|.::: |                      |..|.:..
Zfish   178 NCCGLWKETFRQ----FEDIKANGPSSVGLDLSLH----------------------GFNHTYGV 216

  Fly   138 PEQKQHYWPVERQRHSNYSYLPKELDNFG--VGER---------------------YWLNGDGVF 179
            ||.....  :.:....:.:|....||.||  :..|                     :|||.....
Zfish   217 PEHADTL--LLKDTSVSEAYRLYNLDVFGYEINSRLGLYGSVPLLLAHKPERTAGVFWLNSSETL 279

  Fly   180 LYVESNTPLFIDQNSAAYPDQLCLSAISALPYDPRVTSAKFV--------YHVAVAKDAKAAHRY 236
            :.|:.||    :||..........|.||     || |..:::        :.:.....|:...:|
Zfish   280 VDVKYNT----EQNEDEDEPPGKKSRIS-----PR-TDVRWISESGTIDCFILLGPTPAQVFSQY 334

  Fly   237 AVKTFLGQPTGYPDERMV-----MHPVWSTWAL------------YKAEVSDDVVRDFAKQILDN 284
            |      |.||....|:.     ..|:.|..||            :..|...||      :.:|.
Zfish   335 A------QLTGKCRCRLYNGCARNRPLLSYQALPPLFSLGNHQCRWNYEDEADV------KAVDA 387

  Fly   285 GFNNSQLEIDDDWEDCYGA-----MTFRKNKFPDSKTLTDDLKALGFRVTLWIHPFINNNCT-AI 343
            ||:...:..|..|.|....     .|:...:||:...|...|.....::.:...|.|..:.. :|
Zfish   388 GFDLHGIPYDVIWLDIEHTDGKRYFTWDSKRFPNPAELQHHLMKKKRKLVVISDPHIKMDPDWSI 452

  Fly   344 YDEAKSKGYLVLDHEG--SSDTQWWNSKPKDAAILDFTKTEVQEWFSKRLKRLQDEDGIDSFKF- 405
            |.|||..|:.|.:.||  ...|.|    |.::..|||:.::.:.|::::....:.|...:|... 
Zfish   453 YCEAKKGGHFVKNREGFDFEGTCW----PGESCYLDFSSSKTRLWYARQFSLSKYEGSTESLFVW 513

  Fly   406 -DAGETS-------WLPSDPVLQASSSMVTPLQAVGDYVRTVAAFGDMVEVRSAQNTQDQPIFVR 462
             |..|.|       .:|.| .|.........|..:..:.:.:|.|..:: .||. .|:...|..|
Zfish   514 NDMNEPSVFNGPEQTMPKD-ALHHGGWEHRELHNLYGFYQHMATFEGLL-TRSG-GTERPFILTR 575

  Fly   463 IVDKDSE-----WGWNN-----GLLTLISSMLQMNLNGYPFVLPDMIGGNGYYEKPPTKELFLRW 517
            .....|:     |..:|     .|...|..:|.::|.|..|...| :||   :.:.|..||.:||
Zfish   576 SFFAGSQRLGAIWTGDNVATWEYLKISIPMLLSLSLTGIQFCGAD-VGG---FVQDPDPELLVRW 636

  Fly   518 LQANVFMPALQFSFV-------PWNFDDEAIAISKNFTALHATYTPYIMKLFKRAVDSGEPVNVP 575
            .||....|..:....       ||.|.:|..:..::.........||...||.:|..:..|...|
Zfish   637 YQAGALQPFFRAHSAKMTKRREPWLFGEEVTSAIRSAVQDRYCLLPYWYTLFHQAHTAALPPIRP 701

  Fly   576 LWWIAPTDEVAQSIYDEFLLGEDIIAAPVVVEGATKRDIYLPEGE--WQDGNSDQVYTGPTWVMD 638
            ||...|.|....::.:::::|..::..||...|.|:..:.||...  |.|.|:.:|:.|.. .:|
Zfish   702 LWVEFPKDTSTFAVENQYMIGGALLVCPVTDPGVTEVKVLLPGSNELWYDTNTSEVHKGAR-SLD 765

  Fly   639 YAAPLDTLPYFLRVG 653
            ....|.|:..|.|.|
Zfish   766 VPVTLTTVLVFQRGG 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tobiNP_651391.1 Glyco_hydro_31 246..653 CDD:279404 107/459 (23%)
GH31_NET37 255..621 CDD:269878 94/413 (23%)
gancXP_021323148.1 GH31_N 201..339 CDD:270212 30/177 (17%)
GH31_GANC_GANAB_alpha 358..824 CDD:269889 103/441 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582099
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1501
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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