DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tobi and ganaba

DIOPT Version :9

Sequence 1:NP_651391.1 Gene:tobi / 43072 FlyBaseID:FBgn0261575 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_009300299.1 Gene:ganaba / 100126019 ZFINID:ZDB-GENE-070928-36 Length:984 Species:Danio rerio


Alignment Length:714 Identity:166/714 - (23%)
Similarity:262/714 - (36%) Gaps:177/714 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 YVRLRRGDKLQYELMKGEKSLQTVTFDNFDSSANLVETSSGSYQLT-----------DGQSTVEF 90
            ::|:|: |.:.:::.....|:       :||..::..::|.|.:.|           |||...|.
Zfish   169 HLRVRK-DTISHKISSTVGSM-------WDSIKSVFSSNSESEETTGQQKEEQQTSEDGQIKEEE 225

  Fly    91 TLVKSGVVAGTGSEITHVK------VSRDQVLQGTQ-----PRDCVPLKTGSTHWFSGPEQKQHY 144
            ...|.|:...|....:..|      :|.|..|.|.:     |.....|:..||      |....|
Zfish   226 EEEKPGMWEETFKSHSDSKPNGPSSISLDFSLPGVEHVYGIPEHADTLRLKST------ENSDPY 284

  Fly   145 WPVERQRHSNYSYLPKELDN----FGV--------GER----YWLNGDGVFLYVESNTPLFIDQN 193
                  |..|......||.|    :|.        .||    :|||....::.:.||:|   |..
Zfish   285 ------RLYNLDVFQYELHNPMALYGAVPVLISHSTERTMGIFWLNAAETWVDISSNSP---DTV 340

  Fly   194 SAAYPDQLCLSAISALPYDPRVTSAKFVYHVAV--------AKDAKAAHRYAVKTFLGQPTGYPD 250
            |:..|.                |:.::|....:        .|.|....:||..|  |..:..|.
Zfish   341 SSDAPQ----------------TNVRWVSESGIIDVFIMLGPKPADVFTQYASLT--GTQSFPPL 387

  Fly   251 ERMVMHPV-WSTWALYKAEVSDDVVRDFAKQILDNGFNNSQLEIDDDWEDCYGA-----MTFRKN 309
            ..:..|.. |:    |..:  :||      :.:|.||:...:..|..|.|...|     .|:...
Zfish   388 SALAYHQCRWN----YNDQ--EDV------KAVDQGFDEHDIPYDFIWLDIEHADGKRYFTWDPI 440

  Fly   310 KFPDSKTLTDDLKALGFRVTLWIHPFIN-NNCTAIYDEAKSKGYLVLDHEGSSDTQW-WNSKPKD 372
            |||..|.:...|.....::...:.|.|. ::...|::|.:||.:.|.:.:|.....| |   |.:
Zfish   441 KFPTPKDMLKGLMDKRRKLVAIVDPHIRVDSGYRIHNEIRSKNFYVKNKDGGDYEGWCW---PGN 502

  Fly   373 AAILDFTKTEVQEWFSKRLKRLQDEDGID-------------------SFKFDAGETSW------ 412
            :...|||..|::.|::......|.|..::                   :...||....|      
Zfish   503 SGYPDFTNPEMRAWWASMFAYDQYEGSMENQYIWNDMNEPSVFNGPEVTMHKDAVHGVWEHRDVH 567

  Fly   413 ---------LPSDPVLQASSSMVTPLQAVGDYVRTVAAFGDMVEVRSAQNTQDQPIFVRIVDKDS 468
                     ..|:.::|.|..:..|      :|.|.|.|.......:          |...|..:
Zfish   568 NLYGLYVQKATSEGLIQRSGGVERP------FVLTRAFFAGSQRYGA----------VWTGDNAA 616

  Fly   469 EWGWNNGLLTLISSMLQMNLNGYPFVLPDMIGGNGYYEKPPTKELFLRWLQANVFMPALQFSF-- 531
            |||   .|...|...|.:.|.|..|...| :||   :.|.|:.||.:||.||..:.|..:...  
Zfish   617 EWG---HLKISIPMCLSLGLVGISFCGAD-VGG---FFKHPSAELLVRWYQAGAYQPFFRAHAHI 674

  Fly   532 -----VPWNFDDEAIAISKNFTALHATYTPYIMKLFKRAVDSGEPVNVPLWWIAPTDEVAQSIYD 591
                 .||.|..|..|:.:..........|...:||..|.::|:||..|||...|.:....||.|
Zfish   675 DTPRREPWLFGPENTALIREAVRQRYALLPNWYQLFYNAHNTGQPVMRPLWVEYPAEVTTFSIED 739

  Fly   592 EFLLGEDIIAAPVVVEGATKRDIYLP-EGE-WQDGNSDQVYTGPTWVMDYAAPLDTLPYFLRVG 653
            |:|:|:|::..||..||||....||| :|| |.|.:|.|.:.|.. .:.....:.::|.|.|.|
Zfish   740 EYLIGKDLLVHPVTDEGATGVTAYLPGKGEVWYDVHSLQKHDGDQ-SLYIPVTMSSIPVFQRGG 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tobiNP_651391.1 Glyco_hydro_31 246..653 CDD:279404 113/457 (25%)
GH31_NET37 255..621 CDD:269878 104/416 (25%)
ganabaXP_009300299.1 GH31_N 251..380 CDD:270212 34/161 (21%)
Glyco_hydro_31 361..805 CDD:279404 120/483 (25%)
GH31_GANC_GANAB_alpha 380..846 CDD:269889 115/462 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.