Protein Alignment CG11902 and topi

DIOPT Version :10

• Sequence 1: NP_651389.3
• Gene: CG11902 / 43070
• FlyBaseID: FBgn0028647
• Length: 1426
• Species: Drosophila melanogaster
• Sequence 2: NP_649945.1
• Gene: topi / 41199
• FlyBaseID: FBgn0037751
• Length: 814
• Species: Drosophila melanogaster
• Alignment Length: 153
• Identity: 30/153 - (19%)
• Similarity: 50/153 - (32%)
• Gaps: 62/153 - (40%)

  Fly    90 MQMYKDQHQKNMSTPA-------VAQMLSILMYNRRFFPYYVSNVLAGLDQDGKGVVYSYDPIGH 147
            :|::: :|.||..||.       ....|:|:|..   ..:||:
  Fly   124 LQVFR-RHSKNQPTPCDDSYNWEETVCLNIIMQQ---IDFYVT---------------------- 162

  Fly   148 CEMTTYRAGGSAGPLLQPVLDNQIGQKNMLNADPEP----------------VKMEKAISIIKDT 196
            |.:.|     ..||     .:.||.:||.....|.|                .|:..||...::.
  Fly   163 CAVCT-----KTGP-----QNLQIIRKNCQRVFPSPSRRRMDSKGENEEITYPKLYFAIDGFEEV 217

  Fly   197 FISATERDIYTGDSVIINIITKD 219
            |.....||   |:.|.:.::.:|
  Fly   218 FNDVIVRD---GECVCVELVARD 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11902	NP_651389.3	zf-AD	6..83	CDD:462262
		C2H2 Zn finger	208..228	CDD:275370	3/12 (25%)
		C2H2 Zn finger	236..256	CDD:275370
		C2H2 Zn finger	384..405	CDD:275368
		C2H2 Zn finger	417..437	CDD:275368
		C2H2 Zn finger	447..463	CDD:275368
		C2H2 Zn finger	578..599	CDD:275368
		C2H2 Zn finger	610..629	CDD:275368
		C2H2 Zn finger	640..660	CDD:275368
		SUF4-like	673..>726	CDD:411020
		C2H2 Zn finger	676..703	CDD:411020
		C2H2 Zn finger	676..696	CDD:275368
		C2H2 Zn finger	706..726	CDD:411020
		C2H2 Zn finger	706..726	CDD:275368
		C2H2 Zn finger	762..782	CDD:275368
		C2H2 Zn finger	866..887	CDD:275368
		C2H2 Zn finger	896..918	CDD:275368
		C2H2 Zn finger	926..947	CDD:275368
		C2H2 Zn finger	967..987	CDD:275368
		C2H2 Zn finger	996..1016	CDD:275368
		C2H2 Zn finger	1044..1063	CDD:275368
		C2H2 Zn finger	1224..1244	CDD:275368
		C2H2 Zn finger	1271..1291	CDD:275368
		zf-H2C2_2	1283..1306	CDD:463886
		C2H2 Zn finger	1299..1319	CDD:275368
		C2H2 Zn finger	1327..1347	CDD:275368
		zf-H2C2_2	1340..1364	CDD:463886
		SFP1	<1349..1405	CDD:227516
		C2H2 Zn finger	1355..1375	CDD:275368
		C2H2 Zn finger	1383..1401	CDD:275368
topi	NP_649945.1	C2H2 Zn finger	230..250	CDD:275370	1/8 (13%)
		C2H2 Zn finger	277..297	CDD:275370
		C2H2 Zn finger	431..453	CDD:275368
		COG5048	<450..647	CDD:227381
		C2H2 Zn finger	469..490	CDD:275368
		C2H2 Zn finger	513..564	CDD:275368
		C2H2 Zn finger	541..561	CDD:275368
		C2H2 Zn finger	572..592	CDD:275368
		C2H2 Zn finger	600..620	CDD:275368
		zf-H2C2_2	612..637	CDD:463886
		C2H2 Zn finger	628..646	CDD:275368