DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11902 and CG18011

DIOPT Version :10

Sequence 1:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster


Alignment Length:759 Identity:154/759 - (20%)
Similarity:256/759 - (33%) Gaps:204/759 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   732 YINNQPVVPDVNQEMILARLSRPHGCKLIQCMICLSRHSKISDLRSHLSSHQYELSFAEDRDIPS 796
            ||.....|.|.|.:.:..   :|..|.                  |.|.:...|....:|.|...
  Fly   246 YIYEHEDVMDPNLDNVKV---KPISCS------------------SRLVAQAEESQSDDDIDEGE 289

  Fly   797 ASKAF---YPDLENTLEKDELAEMIMADVQREFDLDRF--ISITNEAGLEL-NLESSETDTESEQ 855
            .|...   :.|::...|.|.:.|.:...|:..|:...|  .::.....|:. ..||..:......
  Fly   290 TSNVVLFNFVDIKEKDEVDNIPEYLATVVKTSFEKLTFQWCTVCKHCSLKCPTFESLFSHLSKAH 354

  Fly   856 EDNHSSLNYPCNLCTTVVKRKHQLYAHQLEEHKWEEAVLV---CSNCQTRFVNESLLDHHSRTLC 917
            :........|...|...:|.:..|..|.:..|.....:.:   |..|:..|.|  :|.::..:..
  Fly   355 KSRRDVYECPIEGCNKELKGRKFLAMHLVLLHAPVAEIPIYGSCPECKLTFSN--ILQYNKHSCA 417

  Fly   918 H--NPQKLFQ--CRKCPLRFRWRENLKLHMEVFHM-----------------LDEL--SIQDDLP 959
            |  ..::.|:  |..|.|.|...:....|.: ||:                 :|||  .:.....
  Fly   418 HVIKKKRGFRSYCEMCSLEFPSWKRFNFHSQ-FHLEKHRPRACFVCDYATTNIDELFQHLNYSHE 481

  Fly   960 KVDGDLQCGKCNRSFRMQKDLTRHTLMHGQ-ESNIFRCRWCARRFYRRANLLQHI-ARHGISVSQ 1022
            .| |.|.|..|:|:||.......|...|.. .|..:.|..|...|..|..|..|: |.||..:| 
  Fly   482 PV-GTLFCDLCDRTFRDPSVFMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSVIS- 544

  Fly  1023 LPYAEAILDSYVNPGGRKKVECRVCNVSFPTIAALRLHLETMPAGSHHDYSSLQNYSITNQMGFE 1087
                                 |.:|:..|.|.|...:|::                   ..:..|
  Fly   545 ---------------------CELCSREFATEATYNIHMK-------------------KHLIIE 569

  Fly  1088 MDLYDSETDDEDSRTHIKPPGAPSSYTCNMCQLRCLRKFELYQHQQAMHRMEKISDGC-----DS 1147
            .|:                      :.|:.|.|....:..|..|      :..:...|     |.
  Fly   570 KDV----------------------HVCSTCGLLSDSRETLLAH------VNSVKTACFGSKIDV 606

  Fly  1148 CLFKS--VCPEIISHHKRTQC--------ENREKQFKCTRCGYKFMWESNLLLHMDLQHVKTEDQ 1202
            .|.:.  ||....|:.|...|        .:::..|.|..||.:|            .|:|....
  Fly   607 ELLRDAYVCEYCSSYFKEKDCLQAHRDSGVHKDGVFLCQPCGKEF------------PHMKLYRH 659

  Fly  1203 ELDESKEASGDEPKTEGQV---FQCGL--CTRKYNRKDRLTAHLKKFHGPDCKPSTAKTPNRPIS 1262
            .|...::...|......::   :.|..  ||..|...:.|..|.::.|     .|.:|...:  |
  Fly   660 HLRNYQQLRSDSTHRRLEICVYYMCDQENCTESYVNWNSLYTHKRRTH-----ESASKQAEK--S 717

  Fly  1263 PKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCEYCTMAFPRSSD------------LQC- 1314
            .|..:.::|.||.|...|..:|.:|:.|........|..|..:: :|.|            ::| 
  Fly   718 SKSAQEWVCQFCLKECRSKMSLSVHVARSHNNDNVTCPLCNSSY-KSHDALAKHHAYWHEPIECP 781

  Fly  1315 -------HRR--------THTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQ 1364
                   :||        .|:.::.:.|:||||||....:::.|.::|.  :.|.|..|  |||.
  Fly   782 ECFKIVKNRRNYDTHVNVVHSNKKRYSCSVCQKGFYHKSEMEAHQKLHG--QSYSCEQC--SFTT 842

  Fly  1365 SN--DLTLHI-RRHTGERPYQCGVCGERFIQGTALKNHRMQQSH 1405
            .|  .|::|: .:|.....::|.||.:||.:...||.| ||::|
  Fly   843 RNKKSLSVHVLGQHYKRFAFECNVCKKRFGRSQGLKTH-MQRAH 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368
C2H2 Zn finger 610..629 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
SUF4-like 673..>726 CDD:411020
C2H2 Zn finger 676..703 CDD:411020
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 706..726 CDD:411020
C2H2 Zn finger 706..726 CDD:275368
C2H2 Zn finger 762..782 CDD:275368 2/19 (11%)
C2H2 Zn finger 866..887 CDD:275368 4/20 (20%)
C2H2 Zn finger 896..918 CDD:275368 5/21 (24%)
C2H2 Zn finger 926..947 CDD:275368 5/20 (25%)
C2H2 Zn finger 967..987 CDD:275368 6/19 (32%)
C2H2 Zn finger 996..1016 CDD:275368 7/20 (35%)
C2H2 Zn finger 1044..1063 CDD:275368 6/18 (33%)
C2H2 Zn finger 1224..1244 CDD:275368 6/21 (29%)
C2H2 Zn finger 1271..1291 CDD:275368 7/19 (37%)
zf-H2C2_2 1283..1306 CDD:463886 5/22 (23%)
C2H2 Zn finger 1299..1319 CDD:275368 7/47 (15%)
C2H2 Zn finger 1327..1347 CDD:275368 8/19 (42%)
zf-H2C2_2 1340..1364 CDD:463886 7/23 (30%)
SFP1 <1349..1405 CDD:227516 20/58 (34%)
C2H2 Zn finger 1355..1375 CDD:275368 8/22 (36%)
C2H2 Zn finger 1383..1401 CDD:275368 8/17 (47%)
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 6/19 (32%)
C2H2 Zn finger 518..538 CDD:275368 6/19 (32%)
C2H2 Zn finger 545..565 CDD:275368 6/38 (16%)
C2H2 Zn finger 575..596 CDD:275371 5/26 (19%)
C2H2 Zn finger 754..775 CDD:275368 4/21 (19%)
C2H2 Zn finger 780..801 CDD:275368 3/20 (15%)
C2H2 Zn finger 809..829 CDD:275368 8/19 (42%)
SUF4-like 852..>891 CDD:411020 12/35 (34%)
C2H2 Zn finger 864..885 CDD:411020 10/21 (48%)
C2H2 Zn finger 864..885 CDD:275368 10/21 (48%)
C2H2 Zn finger 891..917 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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