DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11902 and CG17568

DIOPT Version :10

Sequence 1:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:608 Identity:117/608 - (19%)
Similarity:210/608 - (34%) Gaps:161/608 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   857 DNHSSLNYPCNLCT------------------------TVVKRKHQLYAHQLEEHKWEEAVLVCS 897
            |....||: |.||.                        .:..||:.....|||:   |.:.::|:
  Fly     3 DGSHWLNW-CRLCAKDDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLED---ELSSVLCT 63

  Fly   898 NCQTRFVNESLLDHHSRTLCHNPQKLFQCRKCPLRFRWRENLKLHMEVFHMLDELSIQDDLPKVD 962
            .|.| .::| |:|                        :.|::....::|.:|..       .:.|
  Fly    64 ECYT-LISE-LID------------------------FAEHVTKVQDIFEVLRR-------TETD 95

  Fly   963 GD--LQCGKCNRSFRMQKDLTRHTL-----MHGQESNIFRCRWCARRFYRRANLLQHIARHGISV 1020
            ||  :......:.|.:..|...|.:     :..:..|:::         :.|.||:.......|.
  Fly    96 GDQEMDVAALRQQFGLCDDDWTHIIKPIPALEMESDNVYQ---------KPAELLKDFPLAETSS 151

  Fly  1021 SQLPYAEAILDSYVNPGGRKKVECRVCNVSFPTIAALRLHLETMPAGSHHDYSSLQNYSITNQMG 1085
            .::..::....:::.. .:|.||..:....|..:..:.|...                  |:|:.
  Fly   152 QEMEISKRTTTTHLIQ-TKKNVEMEIPKQEFIDLGPILLEKN------------------TSQLD 197

  Fly  1086 FEMDLYDSETDDEDSRTHIKPPGAPSSYTCNMCQLRCLRKFELYQHQQAMHRMEKISDGC----- 1145
            .| |:.|....:|.|:..:....:|:|...::       |.|:.             |.|     
  Fly   198 ME-DVLDELPQEELSQPRLDSTTSPASMENDV-------KSEML-------------DSCEGDDD 241

  Fly  1146 ----DSCLFKSVCPEIISHHKRTQCENREK--QFKCTRCGYKFMWESNLLLHMDLQHVKTEDQEL 1204
                |..|...|......:...:..|.:.|  :..|.:||..:...::...|::.:..:.|    
  Fly   242 FLPVDGQLMDLVAVATTPNTLESTAEEKAKRGRMDCEKCGKVYRNRASYEKHLERECRRIE---- 302

  Fly  1205 DESKEASGDEPKTEGQVFQCGLCTRKYNRKDRLTAHLKKFHGPDCKPSTAKTPNRPISPKEPKRF 1269
               :....|:..|     .|.:|.:..:....|..|.:..|                  :..|.:
  Fly   303 ---RRVKVDKTTT-----TCDICNKTLSSATALKLHKEGIH------------------QNVKPY 341

  Fly  1270 LCAFCGKAVSSSSNLIIHMRRHTGEKPFKCEYCTMAFPRSSDLQCHRRTHTGERPHVCTVCQKGF 1334
            :|..|||.:.:.:.|..|...||..:||:|..|...|...:.|:.|.:.| .|...||.:|.|..
  Fly   342 ICDSCGKQLKTITALNEHKLVHTESRPFECTVCKAGFKNRARLKAHYQIH-AEPSFVCNICGKKL 405

  Fly  1335 ARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNH 1399
            ........|..:|:.||..||..|...|.:|..|..|:..|||.|||.|..||:.|......::|
  Fly   406 QTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNANCRSH 470

  Fly  1400 RMQQSHYEEGQESVE--PTRRTV 1420
            ::::...|..||...  |:|..|
  Fly   471 KLKKHPQEVQQEDGARLPSRLNV 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368
C2H2 Zn finger 610..629 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
SUF4-like 673..>726 CDD:411020
C2H2 Zn finger 676..703 CDD:411020
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 706..726 CDD:411020
C2H2 Zn finger 706..726 CDD:275368
C2H2 Zn finger 762..782 CDD:275368
C2H2 Zn finger 866..887 CDD:275368 8/44 (18%)
C2H2 Zn finger 896..918 CDD:275368 6/21 (29%)
C2H2 Zn finger 926..947 CDD:275368 1/20 (5%)
C2H2 Zn finger 967..987 CDD:275368 3/24 (13%)
C2H2 Zn finger 996..1016 CDD:275368 3/19 (16%)
C2H2 Zn finger 1044..1063 CDD:275368 2/18 (11%)
C2H2 Zn finger 1224..1244 CDD:275368 4/19 (21%)
C2H2 Zn finger 1271..1291 CDD:275368 6/19 (32%)
zf-H2C2_2 1283..1306 CDD:463886 8/22 (36%)
C2H2 Zn finger 1299..1319 CDD:275368 5/19 (26%)
C2H2 Zn finger 1327..1347 CDD:275368 4/19 (21%)
zf-H2C2_2 1340..1364 CDD:463886 8/23 (35%)
SFP1 <1349..1405 CDD:227516 20/55 (36%)
C2H2 Zn finger 1355..1375 CDD:275368 6/19 (32%)
C2H2 Zn finger 1383..1401 CDD:275368 5/17 (29%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 16/106 (15%)
COG5048 <313..471 CDD:227381 48/176 (27%)
C2H2 Zn finger 314..335 CDD:275368 4/20 (20%)
C2H2 Zn finger 343..363 CDD:275368 6/19 (32%)
C2H2 Zn finger 371..391 CDD:275368 5/19 (26%)
C2H2 Zn finger 398..418 CDD:275368 4/19 (21%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
C2H2 Zn finger 454..475 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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