DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11902 and CG44002

DIOPT Version :10

Sequence 1:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:371 Identity:106/371 - (28%)
Similarity:156/371 - (42%) Gaps:58/371 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1043 ECRVCNVSFPTIAALRLHLETMPAGSHHDYSSLQNYSITNQMGFEMDLYDSETDDEDSRTH-IKP 1106
            :||||..|...:..:....:.:|....|        .|....||::       :..||..| |.|
  Fly     4 KCRVCLASSKNMVNIFEERQDLPVSIAH--------MIIECTGFKV-------EKGDSLPHSICP 53

  Fly  1107 PGAPSSYTCNMCQLRCLRKFELYQHQQAMHRMEKISDGCDSCLFKSVCPEIISHHKRTQCENREK 1171
            |....::..........|.::::...|.....|::|:  |..:..|...|:|...     |..||
  Fly    54 PCVKDAHNAFTIIKTYERSYQVFYEVQDTVLEEELSE--DVIIELSDSDEVILID-----EQEEK 111

  Fly  1172 QFKCTRCGYKFMWESNLLLHMDLQHVKT-EDQELDESKEASGDE-PKTEGQVFQCGLCTRKYNRK 1234
                              :|:......| |....:|||.|..|. .:.:|.:  |..|...:.|.
  Fly   112 ------------------VHLSENKAPTNEVSTQEESKTAQSDNVSEDKGHI--CTQCHMSFRRP 156

  Fly  1235 DRLTAHLKKFH---GPDCKPSTA--------KTPNRPISPKEPKRFLCAFCGKAVSSSSNLIIHM 1288
            ..|..|:.:.|   ||....||:        :|..|.:|  ......|..|.|...|.::.:.|.
  Fly   157 GLLELHILRHHTTDGPRPMSSTSEHAVKEELRTKARQLS--RNSTHTCRLCNKTFCSKASCVRHQ 219

  Fly  1289 RRHTGEKPFKCEYCTMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPY 1353
            :.|||||||.||.|...|...:.::.|.||||||||..|..||..|:....|:||:|||:|||||
  Fly   220 KTHTGEKPFACEICQKPFADLASVKRHLRTHTGERPFKCLTCQSAFSDGSALRQHIRIHTGERPY 284

  Fly  1354 KCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNH 1399
            ||..|:|.|.:.:|...|:..||.|:.::|..|..||.|...|:.|
  Fly   285 KCDMCDKFFRERSDARKHMMSHTAEKRFKCSQCERRFRQPKGLRRH 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368
C2H2 Zn finger 610..629 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
SUF4-like 673..>726 CDD:411020
C2H2 Zn finger 676..703 CDD:411020
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 706..726 CDD:411020
C2H2 Zn finger 706..726 CDD:275368
C2H2 Zn finger 762..782 CDD:275368
C2H2 Zn finger 866..887 CDD:275368
C2H2 Zn finger 896..918 CDD:275368
C2H2 Zn finger 926..947 CDD:275368
C2H2 Zn finger 967..987 CDD:275368
C2H2 Zn finger 996..1016 CDD:275368
C2H2 Zn finger 1044..1063 CDD:275368 5/18 (28%)
C2H2 Zn finger 1224..1244 CDD:275368 5/19 (26%)
C2H2 Zn finger 1271..1291 CDD:275368 5/19 (26%)
zf-H2C2_2 1283..1306 CDD:463886 11/22 (50%)
C2H2 Zn finger 1299..1319 CDD:275368 6/19 (32%)
C2H2 Zn finger 1327..1347 CDD:275368 8/19 (42%)
zf-H2C2_2 1340..1364 CDD:463886 16/23 (70%)
SFP1 <1349..1405 CDD:227516 22/51 (43%)
C2H2 Zn finger 1355..1375 CDD:275368 6/19 (32%)
C2H2 Zn finger 1383..1401 CDD:275368 7/17 (41%)
CG44002NP_608754.1 zf-AD 4..74 CDD:462262 17/84 (20%)
C2H2 Zn finger 146..166 CDD:275368 5/19 (26%)
COG5048 <162..302 CDD:227381 55/141 (39%)
C2H2 Zn finger 202..222 CDD:275368 5/19 (26%)
C2H2 Zn finger 230..250 CDD:275368 6/19 (32%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
SUF4-like 282..>342 CDD:411020 20/49 (41%)
C2H2 Zn finger 286..311 CDD:411020 9/24 (38%)
C2H2 Zn finger 286..306 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..335 CDD:411020 7/17 (41%)
C2H2 Zn finger 314..333 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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