DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11902 and CG11696

DIOPT Version :10

Sequence 1:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster


Alignment Length:834 Identity:148/834 - (17%)
Similarity:233/834 - (27%) Gaps:369/834 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCRTCAVQNSQLLPLSTCLDKDSSKSYYAVLQELTQIDL-----ENTDDNLPQHICSECWRRMES 65
            :||.|.......:|:.. .:....:..:..|.||.:..|     ||  |.:...:|:.|||::..
  Fly     2 ICRLCLEDAEHGVPIFG-QEPPMGQPAHRQLAELIERHLLLVLAEN--DVVSTCLCNRCWRQLAE 63

  Fly    66 AYTF----VQQARKVHGELLAQLRECLDELP-------------IDIPAEQNIKTE--------- 104
            ...|    .::.|.:|..|  ||:..|.|||             .:.|.|..:..|         
  Fly    64 IEQFCSMVAEKQRSLHRSL--QLKTELPELPELTEPEPALVVWNTESPIEPKLSYEGDDIKDHIL 126

  Fly   105 ----VDLDDGGNKSEVEVDDTEATALELKWQPASGSDREFCSGPESD-----------------E 148
                :|....|::.:.:..||    .|..::|.|..|.|  ..||.|                 .
  Fly   127 CEPVIDALSAGDEKDSDYGDT----FEPDFEPESQPDEE--EEPEPDPVKPRPRGRPRKTALQQT 185

  Fly   149 DQVEKKSYHLRRSSRKVK------------------------------HPVESENE---ECKP-- 178
            .|:.|:.|..|:...|.|                              ...|.|.:   |..|  
  Fly   186 HQIIKRKYEKRKQQNKAKITELSLRESRARQRELKRSSAGAEDDQDGDEDEEDEEDVGGELTPDA 250

  Fly   179 -SEPSPVKRRRGRPPG---------------PAKSQA-------MTTDGRHACEVCGKTFSWYRD 220
             .:|.| :.:||||..               |.|..:       :..:.:..|.:|......:.|
  Fly   251 DEQPKP-RGKRGRPKTKKLVTADDNDDTSEVPVKRSSIKEMDDYIAANVKLDCAICAAPLEDFND 314

  Fly   221 MQRHARIHFENASYV-CDTCGKGFLRKDKYIFHLRCHKKREAKWKALQLGKEWRFAERLYSSGKL 284
            ::||.|:..:...|| |  |...:.::..|:.||.|||..:.                       
  Fly   315 LKRHFRVEHDCTGYVKC--CNNRYKKRTLYVDHLHCHKDPQY----------------------- 354

  Fly   285 KRIECKLCGLSCQRMEELRAHLWDHADTETLVNLRTDSDVVREHFPGLPCDLDNIKKQICVDIAD 349
                     .|||                                                    
  Fly   355 ---------FSCQ---------------------------------------------------- 358

  Fly   350 GHLEKYACVVNFHGYELGLSDSDEECDSKESKYHCFVCNMSFNRKHRLMKHTLEDHSQSATTLPW 414
                  :|..||                             .||..::| |.|..|||....:  
  Fly   359 ------SCRKNF-----------------------------LNRNSQVM-HMLRFHSQQQELV-- 385

  Fly   415 QRCSSCKVGFLCLTMYNKHLNTHCQSKIRRYRCRKCSGRFMWPENLQRHACSHREEKTIASQILC 479
            .:|:.|:..|                          :.:|:...:|:.|..:.|.|       :|
  Fly   386 HQCAICEARF--------------------------AKKFLLTMHLKGHKGTERPE-------VC 417

  Fly   480 SLCDISLSSLSQLRLHLITHQHDLNGISPEYNSLFFRSFYPDGLNCSISDLAVRIAEDFEVQDFD 544
            ..|..:..:..:|..| :...|                                 |.||      
  Fly   418 DTCSKTFRTKFELSAH-VKRMH---------------------------------AADF------ 442

  Fly   545 RYYNASTESGQELDLFESETELSDEETSKTSHICLLCGETSNSLMNLMKHQICLHSDG-VAELPC 608
                                         |..||.:||....|..|.:.|:..||.|| |||:  
  Fly   443 -----------------------------TPIICDICGTHFRSKANFLIHKKALHPDGPVAEV-- 476

  Fly   609 RCDYCGSGFVSKALLQQH-RRHRCEKKHSRFHCRICNIRFIWESNYEKHEKTHHNKTKDAEERPT 672
            :|..||.....:..|::| .||......:::.|.:||......:....|.:.||:..:.      
  Fly   477 QCTLCGRWLRDERSLRKHLARHDDRDGDTKYRCLLCNAEKSSRAALSSHMRYHHSAKRH------ 535

  Fly   673 KLKCDQCEKVFIWHKDLNRHKRLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVH 726
              ||..|:|.|...:.|..|...|  .....:.|..|.|.|      |||..:|
  Fly   536 --KCSLCDKEFKLPRALAEHMATH--TGIDLYQCQFCTRTF------KSHANMH 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11902NP_651389.3 zf-AD 6..83 CDD:462262 19/85 (22%)
C2H2 Zn finger 208..228 CDD:275370 6/19 (32%)
C2H2 Zn finger 236..256 CDD:275370 5/19 (26%)
C2H2 Zn finger 384..405 CDD:275368 5/20 (25%)
C2H2 Zn finger 417..437 CDD:275368 3/19 (16%)
C2H2 Zn finger 447..463 CDD:275368 2/15 (13%)
C2H2 Zn finger 578..599 CDD:275368 6/20 (30%)
C2H2 Zn finger 610..629 CDD:275368 5/19 (26%)
C2H2 Zn finger 640..660 CDD:275368 4/19 (21%)
SUF4-like 673..>726 CDD:411020 15/52 (29%)
C2H2 Zn finger 676..703 CDD:411020 7/26 (27%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 706..726 CDD:411020 7/19 (37%)
C2H2 Zn finger 706..726 CDD:275368 7/19 (37%)
C2H2 Zn finger 762..782 CDD:275368
C2H2 Zn finger 866..887 CDD:275368
C2H2 Zn finger 896..918 CDD:275368
C2H2 Zn finger 926..947 CDD:275368
C2H2 Zn finger 967..987 CDD:275368
C2H2 Zn finger 996..1016 CDD:275368
C2H2 Zn finger 1044..1063 CDD:275368
C2H2 Zn finger 1224..1244 CDD:275368
C2H2 Zn finger 1271..1291 CDD:275368
zf-H2C2_2 1283..1306 CDD:463886
C2H2 Zn finger 1299..1319 CDD:275368
C2H2 Zn finger 1327..1347 CDD:275368
zf-H2C2_2 1340..1364 CDD:463886
SFP1 <1349..1405 CDD:227516
C2H2 Zn finger 1355..1375 CDD:275368
C2H2 Zn finger 1383..1401 CDD:275368
CG11696NP_572731.1 zf-AD 2..81 CDD:462262 18/81 (22%)
C2H2 Zn finger 332..349 CDD:275368 4/16 (25%)
C2H2 Zn finger 357..378 CDD:275368 10/108 (9%)
C2H2 Zn finger 388..408 CDD:275368 5/45 (11%)
C2H2 Zn finger 417..438 CDD:275368 4/21 (19%)
C2H2 Zn finger 447..465 CDD:275368 6/17 (35%)
C2H2 Zn finger 478..498 CDD:275368 5/19 (26%)
C2H2 Zn finger 509..529 CDD:275368 4/19 (21%)
zf-H2C2_2 521..545 CDD:463886 7/31 (23%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..583 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.

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