DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11902 and CG2202

DIOPT Version :10

Sequence 1:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster


Alignment Length:1003 Identity:226/1003 - (22%)
Similarity:346/1003 - (34%) Gaps:318/1003 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   472 TIASQILCSLC--DISLSSLSQLRLHLITH----QHDLNGISPEYNSLFFRSFYPDGLNCSISDL 530
            |:.::.:|.:|  |:||..    .||.|.:    :.|.|                          
  Fly    39 TVDAERVCRVCLKDVSLEG----ELHFIFNETPVEQDAN-------------------------- 73

  Fly   531 AVRIAEDFEVQDFDRYYNASTESGQELDLFESETELSDEETSKTSHICLLCGETSNSLMNLMKHQ 595
            ..||.::..:...:|                        ......|:|..|.|.:.:.....:|.
  Fly    74 LARILDECTLHQCER------------------------NDGMPPHMCSSCVEAARNAYRFKRHA 114

  Fly   596 ICLHSDGVA------ELPCRCDYCGSGFVSKALLQQHRRHRCEKKHSRFHCRICNIRFIWESNYE 654
            ...:...||      :|..|.....|.....|||.               |.:|:.:|:......
  Fly   115 ERSYCSLVALLGRSPQLKARGAEAASQTDQVALLP---------------CEMCHDQFLNSLELR 164

  Fly   655 KHEKTHHNKTKDAEERPT------KLKCDQCEKVFIWHKDLNRH-KRLHQPQSAAQFDCPHCHRR 712
            .|....|..||:|....|      ..||..|.:.|...:.|..| .|.|  :..|:..|.||.|.
  Fly   165 LHRNQVHRTTKEATSAGTDGLPSEDFKCKFCPQHFPHLRQLRSHLARSH--EQTARLQCAHCQRT 227

  Fly   713 FHRKDGLKSHLKVHAGNSDYINNQPVVPDVNQEMILA-------RLSRPHGCKLIQCMICLSRHS 770
            |.|:|.|..|          |.||.  .||.::::..       .::...|.:|:...:.|:...
  Fly   228 FSRRDHLLRH----------IRNQH--RDVEEDLLRTWPPADENTMNSDGGDELVSAEVLLNEED 280

  Fly   771 KISDLRSH-LSSHQYELSFAED--RDIPSASKAFYPDL--ENTLEKDELAEMIMADVQREFDLDR 830
            ...::... ...:...:|..||  .:...|::..:..:  |..||.:|:                
  Fly   281 NEDEVVGEAFQCNTNPISSNEDDGEEANGANQTLWLHIKPEPCLEAEEV---------------- 329

  Fly   831 FISITNEAGLELNLESSETDTESEQEDNHSSLNYPCNLCTTVVKRKHQLYAHQLEEHKWEEAVLV 895
                  :..::|.||......|..:....:|::       ..||.:|..........| ||..||
  Fly   330 ------DLAMQLKLEKKRRRREKAEAQAETSID-------RTVKNEHIAIGDSQFSIK-EENQLV 380

  Fly   896 CSNCQTRFVNESLLDHHSRTLCHNPQKLFQCRKCPL----RFRWRENLKLHMEVFHMLDELSIQD 956
            .|:.:.....|..:            ||....:.||    ||....:           |:..:.|
  Fly   381 GSDDEAPMGVEDFM------------KLHVSGELPLSDEERFDGFAD-----------DDSDLDD 422

  Fly   957 DLPKVD----GDLQCGKCNRSFRMQ-------------KDLTRHTLMHGQESN-IFRCRWCARRF 1003
            |....|    ||...|:    ||::             |...|....:..|.| ..||..|.|.|
  Fly   423 DDDDDDEEDAGDDDDGE----FRLKQEPLDGEKPLKKAKSGRRRRRRNKDEPNPDNRCEVCQRTF 483

  Fly  1004 YRRANLLQHIARHGISVSQLPYAEAILDSYVNPGGRKKVECRVCNVSFPTIAALRLHLETMPAGS 1068
            .|..:||:|         :|.:.|           :|...|..|..:|.....|:.|::::.:..
  Fly   484 SRHCHLLRH---------KLSHLE-----------KKPHNCPHCPKAFARSDHLKAHVQSLHSNK 528

  Fly  1069 HHDYSSLQNYSITNQMGFEMDLYDSETDDEDSRTHIKPPGAPSSYTCNMCQLRCLRKFELYQHQQ 1133
            .|                                           .|::|:....|...|.:|:.
  Fly   529 EH-------------------------------------------KCSLCEAAFSRLDALERHKV 550

  Fly  1134 AMHRMEKISDGCDSCLFKSVCPEIISHHKRTQCENREKQFKCTRCGYKFMWESNLLLHMDLQHVK 1198
            :.|..|.:..|.:..|      ::..|    .||...|:|..     |.....:.|||.|.    
  Fly   551 SKHNGEGLEPGSELKL------QLAEH----TCEYCSKRFSS-----KTYLRKHTLLHTDF---- 596

  Fly  1199 TEDQELDESKEASGDEPKTEGQVFQCGLCTRKYNRKDRLTAHLKKFHGPDCKPSTAKTPNRPISP 1263
                                  ::.|..|...:..:.:|..|.|...|                 
  Fly   597 ----------------------LYACKTCDETFRERAQLREHEKTHTG----------------- 622

  Fly  1264 KEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCEYCTMAFPRSSDLQCHRRTHTGERPHVCT 1328
              .:.|||..||.:.:.:..|.:|||||.||||:||.:|..||||::||:.|.|.|||.:|::|.
  Fly   623 --QRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRFCVKAFPRATDLKVHERYHTGTKPNLCN 685

  Fly  1329 VCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQG 1393
            .|.|.|.|:|.|..|||.|:|||||||..|.|||||||||..||||||||| |:|..|...|:|.
  Fly   686 TCGKSFHRAYNLTIHMRTHTGERPYKCDQCPKSFTQSNDLKAHIRRHTGER-YKCPHCDAYFLQL 749

  Fly  1394 TALKNHRMQQSHYEEGQESVEPTRRTVL 1421
            ..::||.| .:|.:..:......:||.|
  Fly   750 YNMRNHCM-SAHNKHIETKTGRLQRTGL 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368 4/20 (20%)
C2H2 Zn finger 610..629 CDD:275368 4/18 (22%)
C2H2 Zn finger 640..660 CDD:275368 4/19 (21%)
SUF4-like 673..>726 CDD:411020 18/53 (34%)
C2H2 Zn finger 676..703 CDD:411020 7/27 (26%)
C2H2 Zn finger 676..696 CDD:275368 6/20 (30%)
C2H2 Zn finger 706..726 CDD:411020 9/19 (47%)
C2H2 Zn finger 706..726 CDD:275368 9/19 (47%)
C2H2 Zn finger 762..782 CDD:275368 1/20 (5%)
C2H2 Zn finger 866..887 CDD:275368 3/20 (15%)
C2H2 Zn finger 896..918 CDD:275368 2/21 (10%)
C2H2 Zn finger 926..947 CDD:275368 4/24 (17%)
C2H2 Zn finger 967..987 CDD:275368 5/32 (16%)
C2H2 Zn finger 996..1016 CDD:275368 8/19 (42%)
C2H2 Zn finger 1044..1063 CDD:275368 5/18 (28%)
C2H2 Zn finger 1224..1244 CDD:275368 5/19 (26%)
C2H2 Zn finger 1271..1291 CDD:275368 7/19 (37%)
zf-H2C2_2 1283..1306 CDD:463886 13/22 (59%)
C2H2 Zn finger 1299..1319 CDD:275368 10/19 (53%)
C2H2 Zn finger 1327..1347 CDD:275368 10/19 (53%)
zf-H2C2_2 1340..1364 CDD:463886 16/23 (70%)
SFP1 <1349..1405 CDD:227516 34/55 (62%)
C2H2 Zn finger 1355..1375 CDD:275368 14/19 (74%)
C2H2 Zn finger 1383..1401 CDD:275368 6/17 (35%)
CG2202NP_572657.2 zf-AD 45..121 CDD:214871 18/129 (14%)
C2H2 Zn finger 150..171 CDD:275368 4/20 (20%)
C2H2 Zn finger 192..213 CDD:275370 6/20 (30%)
C2H2 Zn finger 221..239 CDD:275370 9/27 (33%)
COG5048 <443..730 CDD:227381 106/409 (26%)
C2H2 Zn finger 476..496 CDD:275368 9/28 (32%)
C2H2 Zn finger 504..525 CDD:275368 5/20 (25%)
C2H2 Zn finger 532..548 CDD:275368 4/15 (27%)
C2H2 Zn finger 573..593 CDD:275368 6/24 (25%)
C2H2 Zn finger 600..620 CDD:275368 5/19 (26%)
C2H2 Zn finger 628..648 CDD:275368 7/19 (37%)
C2H2 Zn finger 656..676 CDD:275368 10/19 (53%)
C2H2 Zn finger 684..704 CDD:275368 10/19 (53%)
C2H2 Zn finger 712..732 CDD:275368 14/19 (74%)
C2H2 Zn finger 739..755 CDD:275368 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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