DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10669 and znf-236

DIOPT Version :9

Sequence 1:NP_001163728.1 Gene:CG10669 / 43069 FlyBaseID:FBgn0039329 Length:933 Species:Drosophila melanogaster
Sequence 2:NP_001293225.1 Gene:znf-236 / 3565634 WormBaseID:WBGene00021689 Length:1245 Species:Caenorhabditis elegans


Alignment Length:1012 Identity:210/1012 - (20%)
Similarity:341/1012 - (33%) Gaps:300/1012 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PQWLCYACAEKLEST--YDFVLQARR------------THELWLQKIGDSLNGDDEMEGTAALEC 100
            |...|..|..|:|.|  :|..|:.:.            ...|.:.||.|.|...|.:.||....|
 Worm   108 PDIYCMECRSKIEDTNSHDCRLKPKLFECTECRESFNFEKNLKIHKILDHLKATDFVRGTICQFC 172

  Fly   101 LRE---TPIHLFEI----EGVTIKTEELASTQQAPK------ADPLVR-------------PRIV 139
            .::   .|...|..    ..|.:|:::|...|...:      .|..:|             |:..
 Worm   173 SKDKTHAPFSRFSAYIGHVKVHLKSDDLECEQCGNEFENELDLDHHIRREHSTDVYELVFCPKCK 237

  Fly   140 K---------RSIVHFSDSDEDLDDVPLRQRKIA----------ASVCGSDTTKE--NVCELCNK 183
            |         .|::|.:.     :.|.:|:||.|          ||..|....:|  |||..|||
 Worm   238 KVLTLEESSAHSLLHSAQ-----NSVKIRRRKSAPFPEKPPPKKASHTGKKPVREKKNVCPYCNK 297

  Fly   184 VFRYVTNLYRHK----QRDHGILGKNGEDYEEDYYKCDLCDKTYKYVMALVKHKHKEHGSS--LL 242
            .|.....|.||.    :..|    ......|...:||.:|.|.|.:...|.:||...||::  ::
 Worm   298 AFVRPAELARHSFVHLRAKH----LQSSSTEIPKWKCAICFKEYAHQAGLSEHKRTVHGNAKQIV 358

  Fly   243 SNNSGRKMPSTLAEDANPYSPASISETSTNQSRTNNDS---LVHSIIKAVVLSDEDGHSGEDSYY 304
            ....|...                      ..|:|:|.   .:|.|       ::|  |.:...:
 Worm   359 CRICGMSF----------------------SKRSNHDRHMLKIHPI-------EQD--SRDQCQF 392

  Fly   305 NCDQCSKSYKYIVSLIKHKHKEHLDKESYKQSDDEDDRPL------ASTSASASAPTAKPSRINR 363
            .|..|...:|.:.||..||...||..::.|    ...:||      ...:.......||....:|
 Worm   393 QCPDCPTVFKKLGSLTAHKRACHLRTDTLK----IPTKPLPIYKRHVCKTCKREFRDAKMLEKHR 453

  Fly   364 RVDGFDFHR------SEPNGAKEIKCMICLRRFTKLRELRNHLQNH--PTDFDFEAHGEPIERIA 420
            |......||      ....|..|.||..|.:.|.....|..|:|.|  ..:...|.|.:|...:.
 Worm   454 RFHLLAEHRWRDALLLHGGGGGERKCTYCDKSFVLRASLVWHMQKHFEEEEQQQEHHHQPFCALC 518

  Fly   421 E-GFFKTAVESTAEGLKRRIFRDLRMGVYGRYYSITNQARYEMTLDSSDTDSDGDGDDNVVIRRS 484
            : .||                               :|..|...||.               :.|
 Worm   519 DLNFF-------------------------------SQQEYRQHLDE---------------QHS 537

  Fly   485 YSCELCDSPEARWPRKYLLHQHHQKEHTWLDAPHVCQRCDSRFLNLQLLKHHTSQLCQNTLKR-F 548
            ..|.:|:       :|:...|.::        .|:|.|   :|..    :||...:.|....| .
 Worm   538 VICAVCN-------QKFSSRQVYE--------DHICNR---KFAT----RHHAMMMAQQQTNRVL 580

  Fly   549 MCDKC--PQRFFWRRNLRAHLVEHKCKQESYPCDQCSRSFQDKSAVTKHKLMMHRD-SNMELLPC 610
            :|.:|  |||....|.::.|...| ..::|:.|..|.:||:     |...|.:|.: .:.:.:.|
 Worm   581 ICRQCKPPQRLTTARQIKEHRARH-LPRKSHLCWTCHKSFR-----TAQLLSLHAEVHDRQPIQC 639

  Fly   611 RWCTRTFYRPALLYKHLQ-RHGFTGQDLPLAETLLADASKPAGPKSVQCKICDIQFVSVADLRRH 674
            ..|.:.|:....|.:|.: .||                    |..:.||.:              
 Worm   640 AHCPQVFHSRVALKQHTRISHG--------------------GDTNYQCVV-------------- 670

  Fly   675 ISMQGHSDQPSAYMISTATGFELLLDDTDDSDEETSGRTYS-CDLCDLNFRRRREISEH-----Q 733
                 |.|:..|....:...:.|..|..:..|:|.:.|.:| .:..|........||:.     :
 Worm   671 -----HVDRTMAMSAQSFAEYGLAADQNEGDDDEHAHRAHSVTEWMDSGVVEEEVISQEDQGDIR 730

  Fly   734 YSLH---SFDKLPHNCEHC--IFKTVDKNMLHQHLRTQCMNTEKKF---ACMRCGYKFMWEENLA 790
            |::.   |..:.|..||.|  ::..::  ||..|.:....:|:..:   .|..|..:.......|
 Worm   731 YTIQPILSDAEQPIRCEVCHHLYNNIE--MLCDHWQGSDTDTDHSYGIVTCPICESRIRGASEAA 793

  Fly   791 QHLSTQH--------------SKQPAVPEQQPP-----------------LRRKRRFRYQCPHCW 824
            .||.:.|              |....:|....|                 ::::.:..::||.|.
 Worm   794 NHLRSVHLFARPRIHLQFMKPSTNDLIPITSAPSDSLALAIIPSTTPVTTIQQQVKKGHECPQCL 858

  Fly   825 RSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLNIHMRRHTGEKP-FKCDLCDMRF 888
            :....:..||:|:| :|...::    :.|..|.:.....:.|..||:.|:...| ::|.:||..|
 Worm   859 KVLTRKNDLDRHMR-IHAGARD----FKCPTCSMSFRVKSTLTTHMQTHSDAPPQYQCTVCDKSF 918

  Fly   889 TVHYELKVHRRKHTGERPYQCTFCDKDFARPDKLRRH 925
            .....|.||.|.||||.|::|.|||..|......|.|
 Worm   919 YEKKTLVVHMRIHTGEMPFKCRFCDLHFRTIAMTRTH 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10669NP_001163728.1 zf-AD 4..81 CDD:285071 9/44 (20%)
C2H2 Zn finger 178..199 CDD:275368 8/24 (33%)
C2H2 Zn finger 216..233 CDD:275368 5/16 (31%)
C2H2 Zn finger 520..542 CDD:275368 5/21 (24%)
C2H2 Zn finger 550..570 CDD:275368 7/21 (33%)
C2H2 Zn finger 579..600 CDD:275368 6/20 (30%)
C2H2 Zn finger 610..630 CDD:275368 5/20 (25%)
C2H2 Zn finger 716..737 CDD:275368 4/25 (16%)
C2H2 Zn finger 746..766 CDD:275368 6/21 (29%)
C2H2 Zn finger 776..795 CDD:275368 5/18 (28%)
C2H2 Zn finger 820..838 CDD:275368 6/17 (35%)
C2H2 Zn finger 853..873 CDD:275368 5/19 (26%)
zf-H2C2_2 866..889 CDD:290200 8/23 (35%)
COG5048 877..>930 CDD:227381 21/50 (42%)
C2H2 Zn finger 881..901 CDD:275368 8/19 (42%)
zf-H2C2_2 893..918 CDD:290200 14/24 (58%)
C2H2 Zn finger 909..929 CDD:275368 7/17 (41%)
znf-236NP_001293225.1 C2H2 Zn finger 136..157 CDD:275368 3/20 (15%)
C2H2 Zn finger 169..194 CDD:275368 3/24 (13%)
C2H2 Zn finger 202..222 CDD:275368 3/19 (16%)
C2H2 Zn finger 233..263 CDD:275368 6/34 (18%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..351 CDD:275368 7/20 (35%)
C2H2 Zn finger 359..380 CDD:275368 4/42 (10%)
C2H2 Zn finger 394..412 CDD:275368 6/17 (35%)
C2H2 Zn finger 436..456 CDD:275368 4/19 (21%)
C2H2 Zn finger 479..496 CDD:275368 4/16 (25%)
C2H2 Zn finger 515..536 CDD:275371 6/66 (9%)
C2H2 Zn finger 540..561 CDD:275371 7/38 (18%)
C2H2 Zn finger 582..604 CDD:275368 7/21 (33%)
C2H2 Zn finger 612..632 CDD:275368 7/24 (29%)
C2H2 Zn finger 639..658 CDD:275368 5/18 (28%)
C2H2 Zn finger 854..874 CDD:275368 7/20 (35%)
C2H2 Zn finger 882..902 CDD:275368 5/19 (26%)
C2H2 Zn finger 911..931 CDD:275368 8/19 (42%)
zf-H2C2_2 924..948 CDD:372612 14/23 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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