DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10669 and Zfp142

DIOPT Version :9

Sequence 1:NP_001163728.1 Gene:CG10669 / 43069 FlyBaseID:FBgn0039329 Length:933 Species:Drosophila melanogaster
Sequence 2:XP_038939601.1 Gene:Zfp142 / 316524 RGDID:1309648 Length:1859 Species:Rattus norvegicus


Alignment Length:1134 Identity:226/1134 - (19%)
Similarity:343/1134 - (30%) Gaps:348/1134 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 CYACAEKLESTYDFVLQARRTH------ELWLQKIGDSLNGDDEMEGTAALECLR---------- 102
            |..|..:..|........|:.|      ::|     ...|...|:||  |.:||.          
  Rat   774 CALCDYRTFSNTTLFFHKRKVHGYMPGDQVW-----QFCNASQELEG--ARQCLAPPSDSGPSSQ 831

  Fly   103 -----ETPIHLFEIEGVTI------KTEELASTQ-----QAPKADPLV-RPRIVKRSIVHFSDSD 150
                 |...|..||...:|      :|.|.|||:     :||:.|..| .|.:        .:.:
  Rat   832 LSAQPEKEDHEHEIGASSIVDQALPETNEEASTKRQDGIEAPQEDDQVGSPSL--------GEVE 888

  Fly   151 EDLDDVPLRQRKIAASVCGSDTTKENVCELCNKVFRYV--TNLYRHKQRDHGILGKNGEDYEE-- 211
            |....:.|...::...........|.:.|.....||.:  :...| ..|..|:......|::.  
  Rat   889 EGGCTLHLEALRVELEPEAEPPPLEELTETAAVEFRPLEPSGPLR-TDRPGGLAEPQLPDFDSAG 952

  Fly   212 ----DYYKCDLCDKTYKYVMA------LVKHKHKEHGSSLLSNNSGRKMPSTLAEDANPYSPASI 266
                |.......|......:.      |.|...:...:.|:|..:.....:||..:..|......
  Rat   953 TPAFDSAGTPAFDSAGTSALVAEEEPLLEKLASEPPRNPLISEEAPNTFKATLTAETVPLPQVPE 1017

  Fly   267 SETSTNQSRTNNDSLVHSII-----------------------------KAVVLSDEDGHSGEDS 302
            ||:.....|..:.....:::                             ||:.|..:.|..|...
  Rat  1018 SESLLKAMRRQDKEQAEALVLEGRVQMVVIQGEGRAFRCPHCPFITRREKALTLHSKSGCQGRRE 1082

  Fly   303 YYNCDQCSKSYKYIVSLIKHKHKE---------------------HLDKESYKQSDDEDDRPLAS 346
            ...|.:|..|:|....|..|..|:                     |.:..|.:.|.|.:.|    
  Rat  1083 PLLCPECGASFKQQRGLSTHMLKKCPVLLRKNKALALPKPVSPTLHPELPSSQASQDAESR---- 1143

  Fly   347 TSASASAPTAKPSRINRRVD-----------GFDFH-------------RSEPNGAKE------- 380
                  .|...||::...:.           |.:.|             .|.|.|..|       
  Rat  1144 ------KPPPSPSKVELSISKDASSELPGEPGVEEHLPTPSDFPTSPPGNSLPTGTSEKFHFEQG 1202

  Fly   381 -IKCMICLRRFTKLRELRNHLQNHPTDFDFEAHGEPIERIAEGFFKTAVESTAEGLKRRIFRDLR 444
             ..|..|....::|..:.:|:    |:....||                   ::|.||.     |
  Rat  1203 KFHCNSCTFLCSRLSSITSHV----TEGCRGAH-------------------SQGRKRG-----R 1239

  Fly   445 MGVYGRYYSITNQARYEMTLDSSDTDSDGDGDDNVVIRRS---YSCELCD--------------- 491
            ...:.....:.|.....:...|:|: |.||.|..||.::.   |||..|.               
  Rat  1240 PQTHAVVLPLNNGDSTLLNTGSTDS-SPGDRDTAVVQKQKGTLYSCPTCPFSCQQERTLKTHQTQ 1303

  Fly   492 -----------------------------------SPEARWPRKYL--------------LHQHH 507
                                               || |..||..|              |.||.
  Rat  1304 GCPLEPGDLHCGLCPFTAPAPAALRLHQKRRHPTASP-ASGPRPLLQCGDCGFTCKQSRCLQQHR 1367

  Fly   508 QKEHTWLDAPHVCQRCDSRFLNLQLLKHHTSQLCQNTLKRFMCDKCPQRFFWRRNLRAH------ 566
            :.:|..: .||.|..||........|:.|.|:  ...:.|..|..|||.|.....||.|      
  Rat  1368 RLKHEGV-KPHQCPFCDFSTTRRYRLEAHQSR--HTGVGRIPCSSCPQTFGTNSKLRLHQLRVHD 1429

  Fly   567 -------------------LVEH--KCKQ--ESYPCDQCSRSFQDKSAVTKHKLMMHR------- 601
                               :..|  .|.|  .|:.|.||...|..::|:.:|.|..|.       
  Rat  1430 KTPTHFCPLCDYSGYLRHDITRHVNSCHQGTPSFSCSQCEAQFSSETALKQHALRRHPEPTPSSG 1494

  Fly   602 ---DSNMELLPCRWCTRTFYRPALLYKHLQRHGFTGQDLPLAETLLADASKPAGPK--------- 654
               |.....|.|..|......||.|      .|.|.:..|..|......|.|:.|.         
  Rat  1495 CPVDVTEGPLHCSHCGLLCPSPASL------RGHTRKQHPRLECGACQESFPSRPALDEHRRQHH 1553

  Fly   655 -SVQCKICDIQFVSVADLRRHISMQ----------GHSDQPS--AYMISTATGFELLLDDTDDSD 706
             |.:|::|.........|.:|...|          |.:.|||  ......|...:|:||......
  Rat  1554 FSHRCQLCSFAARERVGLVKHYLEQHEETSTAPSDGDAGQPSLCCPFCDFACRHQLVLDHHVKGH 1618

  Fly   707 EETSGRTYSCDLCDLNFRRRREISEHQYSLHSFDKLPHNCEHCIFKTVDKNMLHQHLRTQCMNTE 771
            ..|  |.|.|..|..:.:.|::|:.|. .:|:.:| |:.|..|.:...|.:.|..|:|..  ..|
  Rat  1619 GGT--RLYKCTDCAYSTKNRQKITWHS-RIHTGEK-PYRCHLCSYACADPSRLKYHMRIH--KEE 1677

  Fly   772 KKFACMRCGYKFMWEENLAQHLSTQHSKQPAVPEQQPPLRRKRRFRYQCPHCWRSFVVQPSLDKH 836
            :|:.|..||||..|...|..|::.....:|                ||||.|........:|..|
  Rat  1678 RKYLCPECGYKCKWVNQLKYHMTKHTGLKP----------------YQCPECEYCTNRADALRVH 1726

  Fly   837 IRDMHVAKKNPGKKYLCSLCGLESLTPNKLNIHMRRHTGEKPFKCDLCDMRFTVHYELKVHRRKH 901
            ....|    ...:.::|..||....|...|..|:|:|:..||:.|::|...|.....|:.|...|
  Rat  1727 RETRH----KEARAFMCEQCGKAFKTRFLLRTHLRKHSEAKPYVCNVCHRAFRWAAGLRHHALTH 1787

  Fly   902 TGERPYQCTFCDKDFARPDKLRRHVFMHN 930
            |...|:.|..|.....:..::.:||..|:
  Rat  1788 TDRHPFFCRLCSYKAKQKFQVVKHVRRHH 1816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10669NP_001163728.1 zf-AD 4..81 CDD:285071 6/32 (19%)
C2H2 Zn finger 178..199 CDD:275368 5/22 (23%)
C2H2 Zn finger 216..233 CDD:275368 3/22 (14%)
C2H2 Zn finger 520..542 CDD:275368 6/21 (29%)
C2H2 Zn finger 550..570 CDD:275368 8/44 (18%)
C2H2 Zn finger 579..600 CDD:275368 7/20 (35%)
C2H2 Zn finger 610..630 CDD:275368 5/19 (26%)
C2H2 Zn finger 716..737 CDD:275368 5/20 (25%)
C2H2 Zn finger 746..766 CDD:275368 6/19 (32%)
C2H2 Zn finger 776..795 CDD:275368 8/18 (44%)
C2H2 Zn finger 820..838 CDD:275368 5/17 (29%)
C2H2 Zn finger 853..873 CDD:275368 7/19 (37%)
zf-H2C2_2 866..889 CDD:290200 8/22 (36%)
COG5048 877..>930 CDD:227381 14/52 (27%)
C2H2 Zn finger 881..901 CDD:275368 5/19 (26%)
zf-H2C2_2 893..918 CDD:290200 7/24 (29%)
C2H2 Zn finger 909..929 CDD:275368 4/19 (21%)
Zfp142XP_038939601.1 COG5048 339..780 CDD:227381 2/5 (40%)
C2H2 Zn finger 364..384 CDD:275368
C2H2 Zn finger 392..412 CDD:275368
C2H2 Zn finger 420..437 CDD:275368
C2H2 Zn finger 454..474 CDD:275368
C2H2 Zn finger 520..539 CDD:275368
C2H2 Zn finger 544..565 CDD:275368
C2H2 Zn finger 573..594 CDD:275368
zf-H2C2_5 600..624 CDD:404746
C2H2 Zn finger 602..622 CDD:275368
C2H2 Zn finger 630..650 CDD:275368
C2H2 Zn finger 658..678 CDD:275368
C2H2 Zn finger 686..706 CDD:275368
C2H2 Zn finger 713..730 CDD:275368
C2H2 Zn finger 1284..1313 CDD:275368 2/28 (7%)
C2H2 Zn finger 1350..1371 CDD:275368 3/20 (15%)
C2H2 Zn finger 1379..1399 CDD:275368 6/21 (29%)
C2H2 Zn finger 1407..1428 CDD:275368 8/20 (40%)
C2H2 Zn finger 1465..1486 CDD:275368 7/20 (35%)
C2H2 Zn finger 1506..1524 CDD:275368 6/23 (26%)
C2H2 Zn finger 1532..1552 CDD:275368 3/19 (16%)
C2H2 Zn finger 1598..1618 CDD:275368 4/19 (21%)
C2H2 Zn finger 1626..1646 CDD:275368 5/20 (25%)
C2H2 Zn finger 1654..1674 CDD:275368 6/19 (32%)
C2H2 Zn finger 1682..1702 CDD:275368 8/19 (42%)
zf-H2C2_2 1695..1719 CDD:404364 8/39 (21%)
C2H2 Zn finger 1710..1731 CDD:275368 5/20 (25%)
C2H2 Zn finger 1739..1759 CDD:275368 7/19 (37%)
C2H2 Zn finger 1767..1787 CDD:275368 5/19 (26%)
C2H2 Zn finger 1795..1815 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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