DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10669 and Zfp39

DIOPT Version :10

Sequence 1:NP_651388.1 Gene:CG10669 / 43069 FlyBaseID:FBgn0039329 Length:933 Species:Drosophila melanogaster
Sequence 2:NP_001100474.2 Gene:Zfp39 / 303173 RGDID:1306633 Length:717 Species:Rattus norvegicus


Alignment Length:806 Identity:175/806 - (21%)
Similarity:281/806 - (34%) Gaps:240/806 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 RHKQRDHGILGKN--GEDYEEDYYKCDLCD---KTYKYVMALVKHKHKEHGSSLLSNNSGRKMPS 252
            |||....|::...  ..|:..|.:: ||.|   |.|:.||.       |...||.|.......|.
  Rat    50 RHKAPAKGLVSFEDVSVDFTWDEWQ-DLDDAQRKLYRDVML-------ETYRSLESLGHCVTKPE 106

  Fly   253 T---LAEDANPYSPASISETS-------TNQSRTNNDS----LVHSIIKAVVLSDEDGHSGEDSY 303
            .   |.:...|:....|.:.|       ...|.||.|:    |.|.:|.....|.::        
  Rat   107 VIFKLEQGTGPWRAEDIPKQSRPDVRKVRELSETNQDNEERHLWHFVITNSNTSTQE-------- 163

  Fly   304 YNCDQCSKSYKYIVSLIKHKHKEHLDKESYKQSDDEDDRPLASTSASASAPTAKPSRINRRVDGF 368
                      |..:..|.:.....:...:.|..:....||:......:::|:.:||.:..     
  Rat   164 ----------KVKLGNILNVGSNRVSNRTIKNGNSSGMRPVTLGVWQSASPSKEPSDLPT----- 213

  Fly   369 DFHRSEPNGAKEIKCMICLRRFTKLRELRNHLQNHPTDFDFEAHGEPIERIAEGFFKTA------ 427
               ..||:|:...|..:             |.::|                  |.:..|      
  Rat   214 ---GEEPDGSLTSKPPM-------------HAEHH------------------GLYNRAPGTGQH 244

  Fly   428 -----VESTAEGLKRRIFRDLRMGVYGRYYSITNQARYEMTLDSSDTDSDGDGDDNVVIRRSYSC 487
                 .|:|.........:...:......:|.:.:|..|:.|::.:.        :.|.:.::.|
  Rat   245 FQCCRQEATCSTKALWTNKGFHVAHRSSKFSESEKAPDEVALNAQEM--------SWVCKETFEC 301

  Fly   488 ELCDSPEARWPRKYLLHQHH-----QKEHTWLDAPHVCQRCDSRFLNLQLLK---------HHTS 538
            .:|   :..:..|:.|.:|.     ||..|       |:.|:..|:|....|         .|..
  Rat   302 SIC---KETFCTKFKLTKHKKIHKGQKYFT-------CRDCEKTFINTSYHKDQRIHVGVGSHRY 356

  Fly   539 QLCQNTL----------------KRFMCDKCPQRFFWRRNLRAHLVEHKCKQES------YPCDQ 581
            :.|:|..                |.:...:..|.|..:.|||       |.|::      |.|:.
  Rat   357 KQCENCFHQKNQQSVHQSVPKGSKLYEMYQSEQSFSEKPNLR-------CCQKTRAGYKPYRCNM 414

  Fly   582 CSRSFQDKSAVTKHKLMMHRDSNMELLP--CRWCTRTFYRPALLYKHLQRHGFTGQDLPLAETLL 644
            |.:||..||.:::|: .:|....    |  |:.|.:.|:..:.|..|.:.|              
  Rat   415 CGKSFYRKSHLSRHQ-RIHTGER----PYGCKECKKAFFHKSSLTIHQRTH-------------- 460

  Fly   645 ADASKPAGPKSVQCKICDIQFVSVADLRRHISMQGHSDQPSAYMISTATGFELLLDDTDDSDEET 709
                  .|.|..:||.|...|...:||..|     |         .|.||               
  Rat   461 ------TGEKPYECKKCRKTFYCKSDLNVH-----H---------RTHTG--------------- 490

  Fly   710 SGRTYSCDLCDLNFRRRREISEHQYSLHSFDKLPHNCEHCIFKTVD-KNMLHQHLRTQCMNTEKK 773
             .:.|.||.|...|..:..:..|: .:|:.|| |:.|:.| .||.: |:.|..|.:|.  ..||.
  Rat   491 -EKPYECDECRKTFYSKSHLIIHR-KIHTGDK-PYECQEC-QKTFNRKSNLTVHQKTH--TGEKP 549

  Fly   774 FACMRCGYKFMWEENLAQHLSTQHSKQPAVPEQQPPLRRKRRFRYQCPHCWRSFVVQPSLDKHIR 838
            :.|..||..|..:.:|:.|......::|                |:|..|.::|..:.||.:|.|
  Rat   550 YECDVCGKTFHRQSHLSMHQGIHSGEKP----------------YKCKECGKAFYQKSSLSRHQR 598

  Fly   839 DMHVAKKNPGKKYLCSLCGLESLTPNKLNIHMRRHTGEKPFKCDLCDMRFTVHYELKVHRRKHTG 903
            : |..    .:.|.|..|....|..:.|.:|.|.|||.||:.|:.|...|.....|.||:|.|||
  Rat   599 N-HTG----DRPYACEECRKTFLHKSSLTVHQRSHTGYKPYSCEECRKTFYSKSHLTVHQRTHTG 658

  Fly   904 ERPYQCTFCDKDFARPDKLRRHVFMH 929
            |:||:|..|.|.|.:...|.||...|
  Rat   659 EKPYECKLCRKAFHQKSYLSRHQITH 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10669NP_651388.1 zf-AD 4..80 CDD:462262
C2H2 Zn finger 178..199 CDD:275368 3/5 (60%)
C2H2 Zn finger 216..233 CDD:275368 7/19 (37%)
C2H2 Zn finger 520..542 CDD:275368 6/30 (20%)
C2H2 Zn finger 550..570 CDD:275368 5/19 (26%)
C2H2 Zn finger 579..600 CDD:275368 7/20 (35%)
C2H2 Zn finger 610..630 CDD:275368 5/19 (26%)
C2H2 Zn finger 716..737 CDD:275368 5/20 (25%)
C2H2 Zn finger 746..766 CDD:275368 7/20 (35%)
C2H2 Zn finger 776..795 CDD:275368 6/18 (33%)
C2H2 Zn finger 820..838 CDD:275368 6/17 (35%)
C2H2 Zn finger 853..873 CDD:275368 6/19 (32%)
zf-H2C2_2 866..889 CDD:463886 10/22 (45%)
C2H2 Zn finger 881..901 CDD:275368 7/19 (37%)
zf-H2C2_2 893..918 CDD:463886 14/24 (58%)
C2H2 Zn finger 909..929 CDD:275368 7/19 (37%)
Zfp39NP_001100474.2 KRAB 59..118 CDD:214630 15/66 (23%)
COG5048 296..697 CDD:227381 122/487 (25%)
C2H2 Zn finger 301..321 CDD:275368 5/22 (23%)
C2H2 Zn finger 329..348 CDD:275368 5/18 (28%)
C2H2 Zn finger 412..432 CDD:275368 7/20 (35%)
C2H2 Zn finger 440..460 CDD:275368 5/19 (26%)
C2H2 Zn finger 468..488 CDD:275368 8/33 (24%)
C2H2 Zn finger 496..516 CDD:275368 5/20 (25%)
C2H2 Zn finger 524..544 CDD:275368 7/20 (35%)
C2H2 Zn finger 552..572 CDD:275368 6/19 (32%)
C2H2 Zn finger 580..600 CDD:275368 7/20 (35%)
C2H2 Zn finger 608..628 CDD:275368 6/19 (32%)
C2H2 Zn finger 636..656 CDD:275368 7/19 (37%)
C2H2 Zn finger 664..684 CDD:275368 7/19 (37%)
C2H2 Zn finger 692..712 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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